RNA–Protein interactions for RNA: ENST00000400919.7

FAAP20-204, Transcript of FA core complex associated protein 20, humanhuman

TSL 3 BASIC

Gene FAAP20, Length 1,413 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-204ENST00000400919 SF3B1O75533 1304 aaKnown RBP eCLIP29.78■■■□□ 2.363e-6■■■■■ 109.1
FAAP20-204ENST00000400919 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.55■■□□□ 1.841e-8■■■■■ 81.6
FAAP20-204ENST00000400919 PCBP2Q15366 365 aaKnown RBP eCLIP26.16■■□□□ 1.782e-9■■■■■ 45
FAAP20-204ENST00000400919 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.01■■□□□ 1.594e-7■■■■■ 40
FAAP20-204ENST00000400919 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.48■■□□□ 1.352e-8■■■■■ 37.4
FAAP20-204ENST00000400919 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.98■■■□□ 2.876e-7■■■■■ 35.3
FAAP20-204ENST00000400919 NCBP2P52298 156 aaKnown RBP eCLIP25.46■■□□□ 1.676e-7■■■■■ 32.1
FAAP20-204ENST00000400919 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.72■■■□□ 2.673e-6■■■■□ 26.6
FAAP20-204ENST00000400919 ZRANB2O95218 330 aaKnown RBP eCLIP27.92■■■□□ 2.061e-5■■■■□ 25.7
FAAP20-204ENST00000400919 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.55■■■□□ 2.167e-7■■■■□ 25.5
FAAP20-204ENST00000400919 HNRNPKP61978 463 aaKnown RBP eCLIP27.36■■□□□ 1.978e-10■■■■□ 24.4
FAAP20-204ENST00000400919 NONOQ15233 471 aaKnown RBP eCLIP31.24■■■□□ 2.592e-6■■■■□ 23.7
FAAP20-204ENST00000400919 DDX3XO00571 662 aaKnown RBP eCLIP28.52■■■□□ 2.162e-8■■■■□ 23.1
FAAP20-204ENST00000400919 SRSF9Q13242 221 aaKnown RBP eCLIP16.86■□□□□ 0.297e-7■■■■□ 22.1
FAAP20-204ENST00000400919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.91■■□□□ 1.265e-7■■■■□ 21.4
FAAP20-204ENST00000400919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.93■■■■■ 4.31e-7■■■■□ 21
FAAP20-204ENST00000400919 PCBP1Q15365 356 aaKnown RBP eCLIP30.4■■■□□ 2.462e-7■■■□□ 18.9
FAAP20-204ENST00000400919 SF3A3Q12874 501 aaKnown RBP eCLIP25.09■■□□□ 1.617e-7■■■□□ 18.1
FAAP20-204ENST00000400919 PPIGQ13427 754 aaKnown RBP eCLIP30.81■■■□□ 2.523e-6■■■□□ 17.5
FAAP20-204ENST00000400919 PABPC4Q13310 644 aaKnown RBP eCLIP32.54■■■□□ 2.82e-7■■■□□ 17.4
FAAP20-204ENST00000400919 EFTUD2Q15029 972 aaKnown RBP eCLIP26.53■■□□□ 1.844e-6■■■□□ 17.4
FAAP20-204ENST00000400919 DDX6P26196 483 aaKnown RBP eCLIP29.03■■■□□ 2.247e-8■■■□□ 17.2
FAAP20-204ENST00000400919 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.1■■□□□ 1.611e-6■■■□□ 16.3
FAAP20-204ENST00000400919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.36■■■■■ 4.535e-8■■■□□ 16
FAAP20-204ENST00000400919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.9■■■□□ 2.72e-8■■■□□ 15.2
FAAP20-204ENST00000400919 SF3B4Q15427 424 aaKnown RBP eCLIP24.88■■□□□ 1.577e-7■■□□□ 13.2
FAAP20-204ENST00000400919 AQRO60306 1485 aaKnown RBP eCLIP47.1■■■■■ 5.132e-6■■□□□ 13.2
FAAP20-204ENST00000400919 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.02■■■□□ 2.881e-7■■□□□ 12.2
FAAP20-204ENST00000400919 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.66■■■□□ 2.54e-10■■□□□ 12.1
FAAP20-204ENST00000400919 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.53■■■□□ 2.81e-7■■□□□ 11.9
FAAP20-204ENST00000400919 LARP4Q71RC2 724 aaKnown RBP eCLIP25.44■■□□□ 1.664e-7■■□□□ 11.5
FAAP20-204ENST00000400919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.56■■■□□ 29e-11■□□□□ 10.8
FAAP20-204ENST00000400919 ILF3Q12906 894 aaKnown RBP eCLIP27.18■■□□□ 1.943e-10■□□□□ 10.6
FAAP20-204ENST00000400919 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.69■■■□□ 2.341e-7■□□□□ 9
FAAP20-204ENST00000400919 RBFOX2O43251 390 aaKnown RBP eCLIP21.61■■□□□ 1.057e-8■□□□□ 8.8
FAAP20-204ENST00000400919 FTOQ9C0B1 505 aaKnown RBP eCLIP30.69■■■□□ 2.51e-15■□□□□ 8.7
Retrieved 36 of 36 RNA–protein pairs in 8.6 ms