RNA–Protein interactions for RNA: ENST00000400097.5

SNRPN-203, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-203ENST00000400097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.32■□□□□ 0.362e-53■■■■■ 172.3
SNRPN-203ENST00000400097 PCBP2Q15366 365 aaKnown RBP eCLIP13.75□□□□□ -0.216e-10■■■■■ 41.1
SNRPN-203ENST00000400097 QKIQ96PU8 341 aaKnown RBP eCLIP14.55□□□□□ -0.084e-11■■■■■ 35.5
SNRPN-203ENST00000400097 GTF2F1P35269 517 aaKnown RBP eCLIP15.55■□□□□ 0.082e-6■■■■□ 23.7
SNRPN-203ENST00000400097 TIAL1Q01085 375 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■■■■□ 19.9
SNRPN-203ENST00000400097 RBFOX2O43251 390 aaKnown RBP eCLIP11.36□□□□□ -0.596e-7■■■■□ 19.8
SNRPN-203ENST00000400097 HNRNPCP07910 306 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■■■■□ 19.6
SNRPN-203ENST00000400097 PRPF4O43172 522 aaKnown RBP eCLIP13.74□□□□□ -0.211e-5■■■■□ 19.3
SNRPN-203ENST00000400097 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.469e-11■■■□□ 19.2
SNRPN-203ENST00000400097 LARP4Q71RC2 724 aaKnown RBP eCLIP13.38□□□□□ -0.273e-8■■■□□ 16.5
SNRPN-203ENST00000400097 EFTUD2Q15029 972 aaKnown RBP eCLIP13.97□□□□□ -0.172e-7■■■□□ 16.1
SNRPN-203ENST00000400097 KHSRPQ92945 711 aaKnown RBP eCLIP15.16■□□□□ 0.021e-7■■□□□ 14
SNRPN-203ENST00000400097 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■□□□ 13.3
SNRPN-203ENST00000400097 ILF3Q12906 894 aaKnown RBP eCLIP14.28□□□□□ -0.127e-7■■□□□ 13.2
SNRPN-203ENST00000400097 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.97■□□□□ 0.155e-7■■□□□ 13
SNRPN-203ENST00000400097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.072e-8■■□□□ 12.6
SNRPN-203ENST00000400097 U2AF2P26368 475 aaKnown RBP eCLIP16.29■□□□□ 0.26e-7■■□□□ 11.7
SNRPN-203ENST00000400097 HNRNPKP61978 463 aaKnown RBP eCLIP14.36□□□□□ -0.118e-6■■□□□ 11.5
SNRPN-203ENST00000400097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.683e-8■□□□□ 11.3
SNRPN-203ENST00000400097 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.32■□□□□ 0.049e-9■□□□□ 10.8
SNRPN-203ENST00000400097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.15□□□□□ -0.33e-9■□□□□ 10.7
SNRPN-203ENST00000400097 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.541e-6■□□□□ 10.6
SNRPN-203ENST00000400097 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.189e-11■□□□□ 10.2
SNRPN-203ENST00000400097 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.176e-7■□□□□ 9.7
SNRPN-203ENST00000400097 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.322e-9■□□□□ 9.4
SNRPN-203ENST00000400097 RPS3P23396 243 aaKnown RBP eCLIP14.12□□□□□ -0.155e-6■□□□□ 9.1
SNRPN-203ENST00000400097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.13■□□□□ 0.012e-9■□□□□ 9
Retrieved 27 of 27 RNA–protein pairs in 43.6 ms