RNA–Protein interactions for RNA: ENST00000399759.7

TRPV1-203, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-203ENST00000399759 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
TRPV1-203ENST00000399759 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
TRPV1-203ENST00000399759 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
TRPV1-203ENST00000399759 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
TRPV1-203ENST00000399759 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
TRPV1-203ENST00000399759 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
TRPV1-203ENST00000399759 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
TRPV1-203ENST00000399759 ABCC9O60706 1549 aa15.09■□□□□ 0.01
TRPV1-203ENST00000399759 PCGF6Q9BYE7 350 aa15.02□□□□□ -0.01
TRPV1-203ENST00000399759 APLP2Q06481 763 aa15□□□□□ -0.01
TRPV1-203ENST00000399759 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
TRPV1-203ENST00000399759 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
TRPV1-203ENST00000399759 PELP1Q8IZL8 1130 aaKnown RBP14.9□□□□□ -0.02
TRPV1-203ENST00000399759 RANGAP1P46060 587 aaPredicted RBP14.87□□□□□ -0.03
TRPV1-203ENST00000399759 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
TRPV1-203ENST00000399759 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
TRPV1-203ENST00000399759 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.043e-7■■■■□ 25.8
TRPV1-203ENST00000399759 CCDC180Q9P1Z9 1646 aa14.78□□□□□ -0.04
TRPV1-203ENST00000399759 LOC105371045A0A1W2PR82 267 aa14.77□□□□□ -0.05
TRPV1-203ENST00000399759 PPARGC1BQ86YN6 1023 aaKnown RBP14.63□□□□□ -0.07
TRPV1-203ENST00000399759 HRCP23327 699 aa14.63□□□□□ -0.07
TRPV1-203ENST00000399759 ATP1B4Q9UN42 357 aaPredicted RBP14.61□□□□□ -0.07
TRPV1-203ENST00000399759 CCER1Q8TC90 406 aaPredicted RBP14.58□□□□□ -0.07
TRPV1-203ENST00000399759 MYT1Q01538 1121 aa14.58□□□□□ -0.08
TRPV1-203ENST00000399759 ZEB1P37275 1124 aaPredicted RBP14.56□□□□□ -0.08
TRPV1-203ENST00000399759 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
TRPV1-203ENST00000399759 SCRIBQ14160 1630 aa14.54□□□□□ -0.08
TRPV1-203ENST00000399759 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
TRPV1-203ENST00000399759 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
TRPV1-203ENST00000399759 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
TRPV1-203ENST00000399759 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
TRPV1-203ENST00000399759 ITGAEP38570 1179 aa14.24□□□□□ -0.13
TRPV1-203ENST00000399759 NACADO15069 1562 aa14.24□□□□□ -0.13
TRPV1-203ENST00000399759 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
TRPV1-203ENST00000399759 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
TRPV1-203ENST00000399759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
TRPV1-203ENST00000399759 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
TRPV1-203ENST00000399759 YTHDC1Q96MU7 727 aaKnown RBP13.99□□□□□ -0.17
TRPV1-203ENST00000399759 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
TRPV1-203ENST00000399759 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.17
TRPV1-203ENST00000399759 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
TRPV1-203ENST00000399759 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
TRPV1-203ENST00000399759 FBLN2P98095 1184 aa13.92□□□□□ -0.18
TRPV1-203ENST00000399759 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
TRPV1-203ENST00000399759 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
TRPV1-203ENST00000399759 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
TRPV1-203ENST00000399759 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
TRPV1-203ENST00000399759 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
TRPV1-203ENST00000399759 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
TRPV1-203ENST00000399759 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
TRPV1-203ENST00000399759 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
TRPV1-203ENST00000399759 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
TRPV1-203ENST00000399759 EEA1Q15075 1411 aa13.77□□□□□ -0.21
TRPV1-203ENST00000399759 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
TRPV1-203ENST00000399759 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
TRPV1-203ENST00000399759 NEFLP07196 543 aa13.73□□□□□ -0.21
TRPV1-203ENST00000399759 CLIP1P30622 1438 aa13.72□□□□□ -0.21
TRPV1-203ENST00000399759 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
TRPV1-203ENST00000399759 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
TRPV1-203ENST00000399759 GOLGA3Q08378 1498 aa13.68□□□□□ -0.22
TRPV1-203ENST00000399759 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
TRPV1-203ENST00000399759 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
TRPV1-203ENST00000399759 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
TRPV1-203ENST00000399759 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
TRPV1-203ENST00000399759 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
TRPV1-203ENST00000399759 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
TRPV1-203ENST00000399759 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
TRPV1-203ENST00000399759 WIZO95785 1651 aa13.62□□□□□ -0.23
TRPV1-203ENST00000399759 SOGA1O94964 1423 aa13.61□□□□□ -0.23
TRPV1-203ENST00000399759 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
TRPV1-203ENST00000399759 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
TRPV1-203ENST00000399759 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
TRPV1-203ENST00000399759 ABCC8Q09428 1581 aa13.56□□□□□ -0.24
TRPV1-203ENST00000399759 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
TRPV1-203ENST00000399759 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
TRPV1-203ENST00000399759 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
TRPV1-203ENST00000399759 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.25
TRPV1-203ENST00000399759 ATAD2BQ9ULI0 1458 aa13.5□□□□□ -0.25
TRPV1-203ENST00000399759 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
TRPV1-203ENST00000399759 CHIC2Q9UKJ5 165 aa13.47□□□□□ -0.25
TRPV1-203ENST00000399759 CUX2O14529 1486 aa13.46□□□□□ -0.25
TRPV1-203ENST00000399759 ANP32CO43423 234 aa13.44□□□□□ -0.26
TRPV1-203ENST00000399759 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
TRPV1-203ENST00000399759 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
TRPV1-203ENST00000399759 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
TRPV1-203ENST00000399759 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
TRPV1-203ENST00000399759 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
TRPV1-203ENST00000399759 TSPY4P0CV99 314 aa13.34□□□□□ -0.27
TRPV1-203ENST00000399759 TSPY10P0CW01 314 aa13.34□□□□□ -0.27
TRPV1-203ENST00000399759 RRP7BPQ9NSQ0 103 aa13.34□□□□□ -0.27
TRPV1-203ENST00000399759 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRPV1-203ENST00000399759 VPS8Q8N3P4 1428 aa13.33□□□□□ -0.28
TRPV1-203ENST00000399759 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
TRPV1-203ENST00000399759 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
TRPV1-203ENST00000399759 PLEKHD1A6NEE1 506 aa13.31□□□□□ -0.28
TRPV1-203ENST00000399759 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
TRPV1-203ENST00000399759 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
TRPV1-203ENST00000399759 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
TRPV1-203ENST00000399759 BCANQ96GW7 911 aa13.28□□□□□ -0.28
TRPV1-203ENST00000399759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms