RNA–Protein interactions for RNA: ENST00000399380.7

CDH2-202, Transcript of cadherin 2, humanhuman

TSL 2 BASIC

Gene CDH2, Length 3,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-202ENST00000399380 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
CDH2-202ENST00000399380 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
CDH2-202ENST00000399380 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
CDH2-202ENST00000399380 HRCP23327 699 aa12.55□□□□□ -0.4
CDH2-202ENST00000399380 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
CDH2-202ENST00000399380 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
CDH2-202ENST00000399380 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
CDH2-202ENST00000399380 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
CDH2-202ENST00000399380 CCDC180Q9P1Z9 1646 aa12.3□□□□□ -0.44
CDH2-202ENST00000399380 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
CDH2-202ENST00000399380 DCAF1Q9Y4B6 1507 aa12.19□□□□□ -0.46
CDH2-202ENST00000399380 PPARGC1BQ86YN6 1023 aaKnown RBP12.15□□□□□ -0.46
CDH2-202ENST00000399380 TRIM26Q12899 539 aaPredicted RBP12.13□□□□□ -0.47
CDH2-202ENST00000399380 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
CDH2-202ENST00000399380 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
CDH2-202ENST00000399380 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
CDH2-202ENST00000399380 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
CDH2-202ENST00000399380 FAM9AQ8IZU1 332 aaPredicted RBP11.79□□□□□ -0.52
CDH2-202ENST00000399380 ABCC9O60706 1549 aa11.76□□□□□ -0.53
CDH2-202ENST00000399380 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
CDH2-202ENST00000399380 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
CDH2-202ENST00000399380 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
CDH2-202ENST00000399380 CCER1Q8TC90 406 aaPredicted RBP11.64□□□□□ -0.55
CDH2-202ENST00000399380 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
CDH2-202ENST00000399380 SCRIBQ14160 1630 aa11.62□□□□□ -0.55
CDH2-202ENST00000399380 CENPBP07199 599 aaPredicted RBP11.62□□□□□ -0.55
CDH2-202ENST00000399380 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
CDH2-202ENST00000399380 MYT1Q01538 1121 aa11.56□□□□□ -0.56
CDH2-202ENST00000399380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
CDH2-202ENST00000399380 DIEXFQ68CQ4 756 aaKnown RBP11.51□□□□□ -0.57
CDH2-202ENST00000399380 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
CDH2-202ENST00000399380 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
CDH2-202ENST00000399380 CECR2Q9BXF3 1484 aa11.41□□□□□ -0.58
CDH2-202ENST00000399380 NACADO15069 1562 aa11.4□□□□□ -0.58
CDH2-202ENST00000399380 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
CDH2-202ENST00000399380 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
CDH2-202ENST00000399380 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
CDH2-202ENST00000399380 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
CDH2-202ENST00000399380 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
CDH2-202ENST00000399380 WIZO95785 1651 aa11.31□□□□□ -0.6
CDH2-202ENST00000399380 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
CDH2-202ENST00000399380 TNIKQ9UKE5 1360 aa11.3□□□□□ -0.6
CDH2-202ENST00000399380 EEA1Q15075 1411 aa11.29□□□□□ -0.6
CDH2-202ENST00000399380 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
CDH2-202ENST00000399380 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
CDH2-202ENST00000399380 APLP2Q06481 763 aa11.26□□□□□ -0.61
CDH2-202ENST00000399380 YTHDC1Q96MU7 727 aaKnown RBP11.26□□□□□ -0.61
CDH2-202ENST00000399380 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
CDH2-202ENST00000399380 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
CDH2-202ENST00000399380 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
CDH2-202ENST00000399380 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
CDH2-202ENST00000399380 ABCC8Q09428 1581 aa11.18□□□□□ -0.62
CDH2-202ENST00000399380 SOGA1O94964 1423 aa11.18□□□□□ -0.62
CDH2-202ENST00000399380 EIF4G1Q04637 1599 aaKnown RBP11.17□□□□□ -0.62
CDH2-202ENST00000399380 MIER1Q8N108 512 aa11.16□□□□□ -0.62
CDH2-202ENST00000399380 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
CDH2-202ENST00000399380 CEP164Q9UPV0 1460 aa11.1□□□□□ -0.63
CDH2-202ENST00000399380 SMARCA2P51531 1590 aa11.1□□□□□ -0.63
CDH2-202ENST00000399380 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
CDH2-202ENST00000399380 CLIP1P30622 1438 aa11.09□□□□□ -0.63
CDH2-202ENST00000399380 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
CDH2-202ENST00000399380 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
CDH2-202ENST00000399380 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
CDH2-202ENST00000399380 BAZ1BQ9UIG0 1483 aaKnown RBP10.99□□□□□ -0.65
CDH2-202ENST00000399380 KIF21BO75037 1637 aa10.98□□□□□ -0.65
CDH2-202ENST00000399380 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
CDH2-202ENST00000399380 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDH2-202ENST00000399380 RAPGEF2Q9Y4G8 1499 aa10.9□□□□□ -0.67
CDH2-202ENST00000399380 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.67
CDH2-202ENST00000399380 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
CDH2-202ENST00000399380 NEFLP07196 543 aa10.84□□□□□ -0.67
CDH2-202ENST00000399380 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
CDH2-202ENST00000399380 ITGAEP38570 1179 aa10.82□□□□□ -0.68
CDH2-202ENST00000399380 CCNB3Q8WWL7 1395 aa10.8□□□□□ -0.68
CDH2-202ENST00000399380 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
CDH2-202ENST00000399380 ATAD2BQ9ULI0 1458 aa10.8□□□□□ -0.68
CDH2-202ENST00000399380 ANP32EQ9BTT0 268 aa10.8□□□□□ -0.68
CDH2-202ENST00000399380 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
CDH2-202ENST00000399380 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
CDH2-202ENST00000399380 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
CDH2-202ENST00000399380 UNC13AQ9UPW8 1703 aa10.78□□□□□ -0.68
CDH2-202ENST00000399380 KIF27Q86VH2 1401 aa10.77□□□□□ -0.69
CDH2-202ENST00000399380 PRXQ9BXM0 1461 aa10.76□□□□□ -0.69
CDH2-202ENST00000399380 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
CDH2-202ENST00000399380 ARAP1Q96P48 1450 aa10.75□□□□□ -0.69
CDH2-202ENST00000399380 FKBP8Q14318 412 aa10.74□□□□□ -0.69
CDH2-202ENST00000399380 BCANQ96GW7 911 aa10.73□□□□□ -0.69
CDH2-202ENST00000399380 CUX2O14529 1486 aa10.73□□□□□ -0.69
CDH2-202ENST00000399380 TIMELESSQ9UNS1 1208 aa10.73□□□□□ -0.69
CDH2-202ENST00000399380 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
CDH2-202ENST00000399380 ANP32CO43423 234 aa10.72□□□□□ -0.69
CDH2-202ENST00000399380 BICRAQ9NZM4 1560 aa10.71□□□□□ -0.69
CDH2-202ENST00000399380 RAB3GAP2Q9H2M9 1393 aa10.71□□□□□ -0.7
CDH2-202ENST00000399380 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
CDH2-202ENST00000399380 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
CDH2-202ENST00000399380 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
CDH2-202ENST00000399380 BIVM-ERCC5R4GMW8 1640 aa10.67□□□□□ -0.7
CDH2-202ENST00000399380 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
CDH2-202ENST00000399380 ATP1B4Q9UN42 357 aaPredicted RBP10.66□□□□□ -0.7
CDH2-202ENST00000399380 ARHGAP35Q9NRY4 1499 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms