RNA–Protein interactions for RNA: ENST00000399310.3

ISPD-201, Transcript of isoprenoid synthase domain containing, humanhuman

TSL 1 (best) BASIC

Gene ISPD, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISPD-201ENST00000399310 NISCHQ9Y2I1 1504 aa41.32■■■■■ 4.2
ISPD-201ENST00000399310 CCDC180Q9P1Z9 1646 aa36.4■■■■□ 3.42
ISPD-201ENST00000399310 ABCC9O60706 1549 aa35.51■■■■□ 3.28
ISPD-201ENST00000399310 DCAF8L2P0C7V8 631 aa34.58■■■■□ 3.13
ISPD-201ENST00000399310 ZCCHC6Q5VYS8 1495 aaKnown RBP34.48■■■■□ 3.11
ISPD-201ENST00000399310 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
ISPD-201ENST00000399310 NACADO15069 1562 aa34.16■■■■□ 3.06
ISPD-201ENST00000399310 DCAF1Q9Y4B6 1507 aa34.06■■■■□ 3.04
ISPD-201ENST00000399310 MYO15BQ96JP2 1530 aa34.01■■■■□ 3.03
ISPD-201ENST00000399310 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
ISPD-201ENST00000399310 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
ISPD-201ENST00000399310 PABPN1Q86U42 306 aaKnown RBP eCLIP33.36■■■□□ 2.93
ISPD-201ENST00000399310 BICRAQ9NZM4 1560 aa33.23■■■□□ 2.91
ISPD-201ENST00000399310 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
ISPD-201ENST00000399310 DNAJC5BQ9UF47 199 aa32.64■■■□□ 2.82
ISPD-201ENST00000399310 CECR2Q9BXF3 1484 aa32.3■■■□□ 2.76
ISPD-201ENST00000399310 EIF4G1Q04637 1599 aaKnown RBP32.27■■■□□ 2.76
ISPD-201ENST00000399310 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
ISPD-201ENST00000399310 SMARCA4P51532 1647 aa31.97■■■□□ 2.71
ISPD-201ENST00000399310 MROH2BQ7Z745 1585 aa31.95■■■□□ 2.71
ISPD-201ENST00000399310 BAZ1AQ9NRL2 1556 aaPredicted RBP31.93■■■□□ 2.7
ISPD-201ENST00000399310 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
ISPD-201ENST00000399310 RSF1Q96T23 1441 aaPredicted RBP31.7■■■□□ 2.67
ISPD-201ENST00000399310 WIZO95785 1651 aa31.63■■■□□ 2.65
ISPD-201ENST00000399310 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
ISPD-201ENST00000399310 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
ISPD-201ENST00000399310 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
ISPD-201ENST00000399310 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
ISPD-201ENST00000399310 HMGXB3Q12766 1538 aa31.4■■■□□ 2.62
ISPD-201ENST00000399310 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
ISPD-201ENST00000399310 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
ISPD-201ENST00000399310 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
ISPD-201ENST00000399310 NESP48681 1621 aa30.9■■■□□ 2.54
ISPD-201ENST00000399310 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
ISPD-201ENST00000399310 LAMC3Q9Y6N6 1575 aa30.67■■■□□ 2.5
ISPD-201ENST00000399310 ERCC6Q03468 1493 aa30.62■■■□□ 2.49
ISPD-201ENST00000399310 CFTRP13569 1480 aa30.61■■■□□ 2.49
ISPD-201ENST00000399310 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
ISPD-201ENST00000399310 CUX2O14529 1486 aa30.44■■■□□ 2.46
ISPD-201ENST00000399310 PDS5BQ9NTI5 1447 aa30.43■■■□□ 2.46
ISPD-201ENST00000399310 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.45
ISPD-201ENST00000399310 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
ISPD-201ENST00000399310 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
ISPD-201ENST00000399310 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
ISPD-201ENST00000399310 MRC2Q9UBG0 1479 aa30.14■■■□□ 2.42
ISPD-201ENST00000399310 URB2Q14146 1524 aaKnown RBP30.11■■■□□ 2.41
ISPD-201ENST00000399310 WDR62O43379 1518 aa30.06■■■□□ 2.4
ISPD-201ENST00000399310 ABCC8Q09428 1581 aa29.99■■■□□ 2.39
ISPD-201ENST00000399310 TOPBP1Q92547 1522 aa29.95■■■□□ 2.38
ISPD-201ENST00000399310 CUX1P39880 1505 aa29.92■■■□□ 2.38
ISPD-201ENST00000399310 DNMBPQ6XZF7 1577 aa29.89■■■□□ 2.38
ISPD-201ENST00000399310 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.379e-6■■■■■ 50.1
ISPD-201ENST00000399310 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
ISPD-201ENST00000399310 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
ISPD-201ENST00000399310 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
ISPD-201ENST00000399310 RAD54L2Q9Y4B4 1467 aa29.7■■■□□ 2.35
ISPD-201ENST00000399310 TOP2BQ02880 1626 aa29.68■■■□□ 2.34
ISPD-201ENST00000399310 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
ISPD-201ENST00000399310 SOGA1O94964 1423 aa29.62■■■□□ 2.33
ISPD-201ENST00000399310 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
ISPD-201ENST00000399310 ZNF608Q9ULD9 1512 aaPredicted RBP29.59■■■□□ 2.33
ISPD-201ENST00000399310 TARBP1Q13395 1621 aaKnown RBP29.59■■■□□ 2.33
ISPD-201ENST00000399310 IFT140Q96RY7 1462 aa29.59■■■□□ 2.33
ISPD-201ENST00000399310 TDRD9Q8NDG6 1382 aaKnown RBP29.51■■■□□ 2.31
ISPD-201ENST00000399310 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.31
ISPD-201ENST00000399310 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
ISPD-201ENST00000399310 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.3
ISPD-201ENST00000399310 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
ISPD-201ENST00000399310 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
ISPD-201ENST00000399310 EIF4G3O43432 1585 aaKnown RBP29.38■■■□□ 2.29
ISPD-201ENST00000399310 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
ISPD-201ENST00000399310 ABCA5Q8WWZ7 1642 aa29.25■■■□□ 2.27
ISPD-201ENST00000399310 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
ISPD-201ENST00000399310 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
ISPD-201ENST00000399310 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
ISPD-201ENST00000399310 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
ISPD-201ENST00000399310 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
ISPD-201ENST00000399310 FBLN2P98095 1184 aa29.08■■■□□ 2.25
ISPD-201ENST00000399310 IGF1RP08069 1367 aa29.06■■■□□ 2.24
ISPD-201ENST00000399310 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
ISPD-201ENST00000399310 CHD1O14646 1710 aa29.01■■■□□ 2.24
ISPD-201ENST00000399310 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
ISPD-201ENST00000399310 OSCARQ8IYS5 282 aa29■■■□□ 2.23
ISPD-201ENST00000399310 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
ISPD-201ENST00000399310 CHMP7Q8WUX9 453 aaPredicted RBP28.97■■■□□ 2.23
ISPD-201ENST00000399310 ADAMTS12P58397 1594 aa28.94■■■□□ 2.22
ISPD-201ENST00000399310 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
ISPD-201ENST00000399310 FHAD1B1AJZ9 1412 aa28.9■■■□□ 2.22
ISPD-201ENST00000399310 CARMIL1Q5VZK9 1371 aa28.86■■■□□ 2.21
ISPD-201ENST00000399310 CSRNP3Q8WYN3 585 aa28.83■■■□□ 2.21
ISPD-201ENST00000399310 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
ISPD-201ENST00000399310 CUL7Q14999 1698 aa28.8■■■□□ 2.2
ISPD-201ENST00000399310 EHMT2Q96KQ7 1210 aa28.74■■■□□ 2.19
ISPD-201ENST00000399310 EEA1Q15075 1411 aa28.73■■■□□ 2.19
ISPD-201ENST00000399310 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
ISPD-201ENST00000399310 PRXQ9BXM0 1461 aa28.71■■■□□ 2.19
ISPD-201ENST00000399310 RIMBP3CA6NJZ7 1639 aa28.71■■■□□ 2.19
ISPD-201ENST00000399310 RIMBP3BA6NNM3 1639 aa28.71■■■□□ 2.19
ISPD-201ENST00000399310 RIMBP3Q9UFD9 1639 aa28.71■■■□□ 2.19
ISPD-201ENST00000399310 RAPGEF2Q9Y4G8 1499 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms