RNA–Protein interactions for RNA: ENST00000399212.5

SETD4-206, Transcript of SET domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene SETD4, Length 3,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-206ENST00000399212 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
SETD4-206ENST00000399212 DCAF8L2P0C7V8 631 aa18.76■□□□□ 0.59
SETD4-206ENST00000399212 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
SETD4-206ENST00000399212 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
SETD4-206ENST00000399212 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
SETD4-206ENST00000399212 ABCC9O60706 1549 aa17.66■□□□□ 0.42
SETD4-206ENST00000399212 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
SETD4-206ENST00000399212 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
SETD4-206ENST00000399212 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
SETD4-206ENST00000399212 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
SETD4-206ENST00000399212 NACADO15069 1562 aa17.32■□□□□ 0.36
SETD4-206ENST00000399212 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
SETD4-206ENST00000399212 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SETD4-206ENST00000399212 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
SETD4-206ENST00000399212 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
SETD4-206ENST00000399212 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
SETD4-206ENST00000399212 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
SETD4-206ENST00000399212 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
SETD4-206ENST00000399212 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
SETD4-206ENST00000399212 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
SETD4-206ENST00000399212 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
SETD4-206ENST00000399212 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
SETD4-206ENST00000399212 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
SETD4-206ENST00000399212 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
SETD4-206ENST00000399212 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
SETD4-206ENST00000399212 HRCP23327 699 aa16.48■□□□□ 0.23
SETD4-206ENST00000399212 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
SETD4-206ENST00000399212 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
SETD4-206ENST00000399212 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
SETD4-206ENST00000399212 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
SETD4-206ENST00000399212 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
SETD4-206ENST00000399212 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
SETD4-206ENST00000399212 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
SETD4-206ENST00000399212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
SETD4-206ENST00000399212 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
SETD4-206ENST00000399212 WIZO95785 1651 aa16.09■□□□□ 0.17
SETD4-206ENST00000399212 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
SETD4-206ENST00000399212 CCER1Q8TC90 406 aaPredicted RBP16.06■□□□□ 0.16
SETD4-206ENST00000399212 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.15
SETD4-206ENST00000399212 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
SETD4-206ENST00000399212 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
SETD4-206ENST00000399212 HMGXB3Q12766 1538 aa15.96■□□□□ 0.15
SETD4-206ENST00000399212 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
SETD4-206ENST00000399212 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
SETD4-206ENST00000399212 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
SETD4-206ENST00000399212 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
SETD4-206ENST00000399212 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
SETD4-206ENST00000399212 SOGA1O94964 1423 aa15.87■□□□□ 0.13
SETD4-206ENST00000399212 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
SETD4-206ENST00000399212 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
SETD4-206ENST00000399212 APLP2Q06481 763 aa15.84■□□□□ 0.13
SETD4-206ENST00000399212 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
SETD4-206ENST00000399212 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
SETD4-206ENST00000399212 ITGAEP38570 1179 aa15.77■□□□□ 0.11
SETD4-206ENST00000399212 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
SETD4-206ENST00000399212 YTHDC1Q96MU7 727 aaKnown RBP15.64■□□□□ 0.09
SETD4-206ENST00000399212 CEP162Q5TB80 1403 aa15.64■□□□□ 0.09
SETD4-206ENST00000399212 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
SETD4-206ENST00000399212 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
SETD4-206ENST00000399212 CFTRP13569 1480 aa15.5■□□□□ 0.07
SETD4-206ENST00000399212 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
SETD4-206ENST00000399212 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
SETD4-206ENST00000399212 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
SETD4-206ENST00000399212 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
SETD4-206ENST00000399212 TNIKQ9UKE5 1360 aa15.44■□□□□ 0.06
SETD4-206ENST00000399212 CLIP1P30622 1438 aa15.44■□□□□ 0.06
SETD4-206ENST00000399212 NESP48681 1621 aa15.43■□□□□ 0.06
SETD4-206ENST00000399212 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
SETD4-206ENST00000399212 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
SETD4-206ENST00000399212 RAPGEF2Q9Y4G8 1499 aa15.37■□□□□ 0.05
SETD4-206ENST00000399212 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
SETD4-206ENST00000399212 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
SETD4-206ENST00000399212 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
SETD4-206ENST00000399212 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
SETD4-206ENST00000399212 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
SETD4-206ENST00000399212 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
SETD4-206ENST00000399212 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
SETD4-206ENST00000399212 NEUROD1Q13562 356 aa15.27■□□□□ 0.04
SETD4-206ENST00000399212 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
SETD4-206ENST00000399212 EEA1Q15075 1411 aa15.25■□□□□ 0.03
SETD4-206ENST00000399212 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
SETD4-206ENST00000399212 THOC2Q8NI27 1593 aaKnown RBP15.23■□□□□ 0.03
SETD4-206ENST00000399212 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
SETD4-206ENST00000399212 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
SETD4-206ENST00000399212 MIER1Q8N108 512 aa15.19■□□□□ 0.02
SETD4-206ENST00000399212 WDR62O43379 1518 aa15.17■□□□□ 0.02
SETD4-206ENST00000399212 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
SETD4-206ENST00000399212 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
SETD4-206ENST00000399212 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
SETD4-206ENST00000399212 BIVM-ERCC5R4GMW8 1640 aa15.16■□□□□ 0.02
SETD4-206ENST00000399212 CUX2O14529 1486 aa15.16■□□□□ 0.02
SETD4-206ENST00000399212 CUX1P39880 1505 aa15.16■□□□□ 0.02
SETD4-206ENST00000399212 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
SETD4-206ENST00000399212 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
SETD4-206ENST00000399212 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
SETD4-206ENST00000399212 VPS8Q8N3P4 1428 aa15.14■□□□□ 0.01
SETD4-206ENST00000399212 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
SETD4-206ENST00000399212 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
SETD4-206ENST00000399212 FBLN2P98095 1184 aa15.11■□□□□ 0.01
SETD4-206ENST00000399212 ACIN1Q9UKV3 1341 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms