RNA–Protein interactions for RNA: ENST00000399091.1

AC007952.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC007952.2, Length 1,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007952.2-201ENST00000399091 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
AC007952.2-201ENST00000399091 ABCC9O60706 1549 aa32.41■■■□□ 2.78
AC007952.2-201ENST00000399091 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
AC007952.2-201ENST00000399091 DNAJC5BQ9UF47 199 aa31■■■□□ 2.55
AC007952.2-201ENST00000399091 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
AC007952.2-201ENST00000399091 NACADO15069 1562 aa30.32■■■□□ 2.45
AC007952.2-201ENST00000399091 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
AC007952.2-201ENST00000399091 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
AC007952.2-201ENST00000399091 UNC13AQ9UPW8 1703 aa29.96■■■□□ 2.39
AC007952.2-201ENST00000399091 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
AC007952.2-201ENST00000399091 MYO15BQ96JP2 1530 aa29.79■■■□□ 2.36
AC007952.2-201ENST00000399091 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
AC007952.2-201ENST00000399091 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
AC007952.2-201ENST00000399091 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
AC007952.2-201ENST00000399091 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.27
AC007952.2-201ENST00000399091 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
AC007952.2-201ENST00000399091 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
AC007952.2-201ENST00000399091 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
AC007952.2-201ENST00000399091 DNAJC5Q9H3Z4 198 aa28.84■■■□□ 2.21
AC007952.2-201ENST00000399091 CUX2O14529 1486 aa28.18■■■□□ 2.1
AC007952.2-201ENST00000399091 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
AC007952.2-201ENST00000399091 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
AC007952.2-201ENST00000399091 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
AC007952.2-201ENST00000399091 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
AC007952.2-201ENST00000399091 NESP48681 1621 aa27.71■■■□□ 2.03
AC007952.2-201ENST00000399091 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
AC007952.2-201ENST00000399091 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
AC007952.2-201ENST00000399091 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
AC007952.2-201ENST00000399091 BAZ1BQ9UIG0 1483 aaKnown RBP27.5■■□□□ 1.99
AC007952.2-201ENST00000399091 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
AC007952.2-201ENST00000399091 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
AC007952.2-201ENST00000399091 LAMC3Q9Y6N6 1575 aa27.44■■□□□ 1.98
AC007952.2-201ENST00000399091 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
AC007952.2-201ENST00000399091 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
AC007952.2-201ENST00000399091 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
AC007952.2-201ENST00000399091 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
AC007952.2-201ENST00000399091 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
AC007952.2-201ENST00000399091 MRC2Q9UBG0 1479 aa27.08■■□□□ 1.93
AC007952.2-201ENST00000399091 WDR62O43379 1518 aa27.05■■□□□ 1.92
AC007952.2-201ENST00000399091 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
AC007952.2-201ENST00000399091 WIZO95785 1651 aa26.85■■□□□ 1.89
AC007952.2-201ENST00000399091 OSCARQ8IYS5 282 aa26.84■■□□□ 1.89
AC007952.2-201ENST00000399091 FANCD2Q9BXW9 1451 aa26.8■■□□□ 1.88
AC007952.2-201ENST00000399091 CFTRP13569 1480 aa26.73■■□□□ 1.87
AC007952.2-201ENST00000399091 URB2Q14146 1524 aaKnown RBP26.63■■□□□ 1.85
AC007952.2-201ENST00000399091 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
AC007952.2-201ENST00000399091 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
AC007952.2-201ENST00000399091 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
AC007952.2-201ENST00000399091 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
AC007952.2-201ENST00000399091 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
AC007952.2-201ENST00000399091 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
AC007952.2-201ENST00000399091 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
AC007952.2-201ENST00000399091 ARHGEF11O15085 1522 aa26.36■■□□□ 1.81
AC007952.2-201ENST00000399091 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
AC007952.2-201ENST00000399091 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
AC007952.2-201ENST00000399091 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
AC007952.2-201ENST00000399091 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
AC007952.2-201ENST00000399091 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
AC007952.2-201ENST00000399091 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
AC007952.2-201ENST00000399091 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.77
AC007952.2-201ENST00000399091 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
AC007952.2-201ENST00000399091 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
AC007952.2-201ENST00000399091 CHD1O14646 1710 aa26.07■■□□□ 1.76
AC007952.2-201ENST00000399091 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
AC007952.2-201ENST00000399091 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
AC007952.2-201ENST00000399091 FBLN2P98095 1184 aa25.95■■□□□ 1.74
AC007952.2-201ENST00000399091 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
AC007952.2-201ENST00000399091 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
AC007952.2-201ENST00000399091 TDRD9Q8NDG6 1382 aaKnown RBP25.83■■□□□ 1.73
AC007952.2-201ENST00000399091 SOGA1O94964 1423 aa25.82■■□□□ 1.72
AC007952.2-201ENST00000399091 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
AC007952.2-201ENST00000399091 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
AC007952.2-201ENST00000399091 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
AC007952.2-201ENST00000399091 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
AC007952.2-201ENST00000399091 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
AC007952.2-201ENST00000399091 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
AC007952.2-201ENST00000399091 FGD5Q6ZNL6 1462 aa25.68■■□□□ 1.7
AC007952.2-201ENST00000399091 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
AC007952.2-201ENST00000399091 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
AC007952.2-201ENST00000399091 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
AC007952.2-201ENST00000399091 CUX1P39880 1505 aa25.59■■□□□ 1.69
AC007952.2-201ENST00000399091 GAPVD1Q14C86 1478 aa25.54■■□□□ 1.68
AC007952.2-201ENST00000399091 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
AC007952.2-201ENST00000399091 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
AC007952.2-201ENST00000399091 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
AC007952.2-201ENST00000399091 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
AC007952.2-201ENST00000399091 GRIN2AQ12879 1464 aa25.3■■□□□ 1.64
AC007952.2-201ENST00000399091 NUP160Q12769 1436 aa25.29■■□□□ 1.64
AC007952.2-201ENST00000399091 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
AC007952.2-201ENST00000399091 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
AC007952.2-201ENST00000399091 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
AC007952.2-201ENST00000399091 WRNQ14191 1432 aaPredicted RBP eCLIP25.17■■□□□ 1.62
AC007952.2-201ENST00000399091 KIF13AQ9H1H9 1805 aa25.16■■□□□ 1.62
AC007952.2-201ENST00000399091 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
AC007952.2-201ENST00000399091 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
AC007952.2-201ENST00000399091 PRG4Q92954 1404 aaPredicted RBP25.05■■□□□ 1.6
AC007952.2-201ENST00000399091 JPH4Q96JJ6 628 aa25.04■■□□□ 1.6
AC007952.2-201ENST00000399091 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
AC007952.2-201ENST00000399091 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
AC007952.2-201ENST00000399091 ABCC10Q5T3U5 1492 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms