RNA–Protein interactions for RNA: ENST00000398970.5

CRK-202, Transcript of CRK proto-oncogene, adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene CRK, Length 3,675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRK-202ENST00000398970 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
CRK-202ENST00000398970 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
CRK-202ENST00000398970 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
CRK-202ENST00000398970 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
CRK-202ENST00000398970 ABCC9O60706 1549 aa28.33■■■□□ 2.13
CRK-202ENST00000398970 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
CRK-202ENST00000398970 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
CRK-202ENST00000398970 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
CRK-202ENST00000398970 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
CRK-202ENST00000398970 EHMT2Q96KQ7 1210 aa27.03■■□□□ 1.92
CRK-202ENST00000398970 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
CRK-202ENST00000398970 NACADO15069 1562 aa26.8■■□□□ 1.88
CRK-202ENST00000398970 FAM9AQ8IZU1 332 aaPredicted RBP26.79■■□□□ 1.88
CRK-202ENST00000398970 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
CRK-202ENST00000398970 RB1CC1Q8TDY2 1594 aa26.73■■□□□ 1.87
CRK-202ENST00000398970 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
CRK-202ENST00000398970 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
CRK-202ENST00000398970 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
CRK-202ENST00000398970 MYO15BQ96JP2 1530 aa26.43■■□□□ 1.82
CRK-202ENST00000398970 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
CRK-202ENST00000398970 MROH2BQ7Z745 1585 aa26.23■■□□□ 1.79
CRK-202ENST00000398970 WIZO95785 1651 aa25.96■■□□□ 1.75
CRK-202ENST00000398970 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
CRK-202ENST00000398970 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.74
CRK-202ENST00000398970 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
CRK-202ENST00000398970 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
CRK-202ENST00000398970 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
CRK-202ENST00000398970 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
CRK-202ENST00000398970 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
CRK-202ENST00000398970 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
CRK-202ENST00000398970 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
CRK-202ENST00000398970 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
CRK-202ENST00000398970 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
CRK-202ENST00000398970 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
CRK-202ENST00000398970 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
CRK-202ENST00000398970 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
CRK-202ENST00000398970 CSRNP3Q8WYN3 585 aa25.24■■□□□ 1.63
CRK-202ENST00000398970 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
CRK-202ENST00000398970 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
CRK-202ENST00000398970 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
CRK-202ENST00000398970 WRNQ14191 1432 aaPredicted RBP eCLIP25.16■■□□□ 1.62
CRK-202ENST00000398970 SOGA1O94964 1423 aa25.15■■□□□ 1.62
CRK-202ENST00000398970 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.6
CRK-202ENST00000398970 APLP2Q06481 763 aa25.05■■□□□ 1.6
CRK-202ENST00000398970 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
CRK-202ENST00000398970 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
CRK-202ENST00000398970 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
CRK-202ENST00000398970 CC2D2AQ9P2K1 1620 aa24.87■■□□□ 1.57
CRK-202ENST00000398970 P3H3Q8IVL6 736 aa24.84■■□□□ 1.57
CRK-202ENST00000398970 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
CRK-202ENST00000398970 NESP48681 1621 aa24.73■■□□□ 1.55
CRK-202ENST00000398970 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
CRK-202ENST00000398970 FBLN2P98095 1184 aa24.65■■□□□ 1.54
CRK-202ENST00000398970 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
CRK-202ENST00000398970 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
CRK-202ENST00000398970 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
CRK-202ENST00000398970 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
CRK-202ENST00000398970 ITGAEP38570 1179 aa24.61■■□□□ 1.53
CRK-202ENST00000398970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.56■■□□□ 1.52
CRK-202ENST00000398970 CCER1Q8TC90 406 aaPredicted RBP24.56■■□□□ 1.52
CRK-202ENST00000398970 CUX2O14529 1486 aa24.56■■□□□ 1.52
CRK-202ENST00000398970 CFTRP13569 1480 aa24.56■■□□□ 1.52
CRK-202ENST00000398970 FANCD2Q9BXW9 1451 aa24.53■■□□□ 1.52
CRK-202ENST00000398970 ARID3CA6NKF2 412 aa24.53■■□□□ 1.52
CRK-202ENST00000398970 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
CRK-202ENST00000398970 HRCP23327 699 aa24.53■■□□□ 1.52
CRK-202ENST00000398970 GOLGA3Q08378 1498 aa24.52■■□□□ 1.52
CRK-202ENST00000398970 EEA1Q15075 1411 aa24.52■■□□□ 1.52
CRK-202ENST00000398970 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
CRK-202ENST00000398970 CLIP1P30622 1438 aa24.48■■□□□ 1.51
CRK-202ENST00000398970 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
CRK-202ENST00000398970 RAPGEF2Q9Y4G8 1499 aa24.46■■□□□ 1.51
CRK-202ENST00000398970 CEP164Q9UPV0 1460 aa24.43■■□□□ 1.5
CRK-202ENST00000398970 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
CRK-202ENST00000398970 CUX1P39880 1505 aa24.4■■□□□ 1.5
CRK-202ENST00000398970 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
CRK-202ENST00000398970 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
CRK-202ENST00000398970 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
CRK-202ENST00000398970 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
CRK-202ENST00000398970 TOP2BQ02880 1626 aa24.23■■□□□ 1.47
CRK-202ENST00000398970 IGF1RP08069 1367 aa24.22■■□□□ 1.47
CRK-202ENST00000398970 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
CRK-202ENST00000398970 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.46
CRK-202ENST00000398970 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
CRK-202ENST00000398970 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
CRK-202ENST00000398970 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
CRK-202ENST00000398970 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.44
CRK-202ENST00000398970 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
CRK-202ENST00000398970 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
CRK-202ENST00000398970 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
CRK-202ENST00000398970 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
CRK-202ENST00000398970 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
CRK-202ENST00000398970 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
CRK-202ENST00000398970 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
CRK-202ENST00000398970 BIVM-ERCC5R4GMW8 1640 aa23.9■■□□□ 1.42
CRK-202ENST00000398970 DNMBPQ6XZF7 1577 aa23.88■■□□□ 1.41
CRK-202ENST00000398970 KIF21BO75037 1637 aa23.86■■□□□ 1.41
CRK-202ENST00000398970 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
CRK-202ENST00000398970 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
CRK-202ENST00000398970 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms