RNA: ENST00000398398.6

MBD2-202, Transcript of methyl-CpG binding domain protein 2, humanhuman

TSL 2 BASIC

Gene MBD2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2-202ENST00000398398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.45■■■□□ 2.472e-6■■■■■ 118.4
MBD2-202ENST00000398398 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.76■■□□□ 1.712e-12■■■■■ 101.6
MBD2-202ENST00000398398 SF3B1O75533 1304 aaKnown RBP eCLIP31.63■■■□□ 2.657e-9■■■■■ 80.4
MBD2-202ENST00000398398 AARSP49588 968 aaKnown RBP eCLIP31.16■■■□□ 2.589e-7■■■■■ 61.1
MBD2-202ENST00000398398 QKIQ96PU8 341 aaKnown RBP eCLIP28.2■■■□□ 2.12e-12■■■■■ 50.8
MBD2-202ENST00000398398 NOLC1Q14978 699 aaKnown RBP eCLIP31.38■■■□□ 2.612e-37■■■■■ 40.6
MBD2-202ENST00000398398 NIPBLQ6KC79 2804 aaeCLIP25.84■■□□□ 1.739e-15■■■■■ 39
MBD2-202ENST00000398398 EFTUD2Q15029 972 aaKnown RBP eCLIP26.71■■□□□ 1.872e-8■■■■■ 31.4
MBD2-202ENST00000398398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.42■■□□□ 1.182e-7■■■■■ 28.9
MBD2-202ENST00000398398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.71■■■■■ 4.754e-8■■■■■ 28.1
MBD2-202ENST00000398398 GRSF1Q12849 480 aaKnown RBP eCLIP30.68■■■□□ 2.57e-9■■■■■ 27.7
MBD2-202ENST00000398398 HNRNPMP52272 730 aaKnown RBP eCLIP46.05■■■■■ 4.965e-8■■■■□ 25.8
MBD2-202ENST00000398398 PUM1Q14671 1186 aaKnown RBP eCLIP30.69■■■□□ 2.51e-7■■■■□ 24.9
MBD2-202ENST00000398398 NCBP2P52298 156 aaKnown RBP eCLIP26.05■■□□□ 1.763e-6■■■■□ 22.4
MBD2-202ENST00000398398 RBFOX2O43251 390 aaKnown RBP eCLIP21.62■■□□□ 1.052e-6■■■■□ 22.1
MBD2-202ENST00000398398 PRPF4O43172 522 aaKnown RBP eCLIP27.32■■□□□ 1.963e-7■■■■□ 21
MBD2-202ENST00000398398 DKC1O60832 514 aaKnown RBP eCLIP32.18■■■□□ 2.741e-323■■■■□ 19.3
MBD2-202ENST00000398398 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.7■■■■□ 3.153e-16■■■□□ 16.4
MBD2-202ENST00000398398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP47.14■■■■■ 5.144e-7■■□□□ 12.9
MBD2-202ENST00000398398 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■■□□□ 12.8
MBD2-202ENST00000398398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.67■■□□□ 1.542e-10■■□□□ 12.3
MBD2-202ENST00000398398 GTF2F1P35269 517 aaKnown RBP eCLIP32.37■■■□□ 2.779e-7■□□□□ 11.3
MBD2-202ENST00000398398 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.6■■■□□ 2.971e-6■□□□□ 10.3
MBD2-202ENST00000398398 ZNF622Q969S3 477 aaKnown RBP eCLIP38.05■■■■□ 3.687e-6■□□□□ 9.9
MBD2-202ENST00000398398 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.49■■■□□ 2.636e-7■□□□□ 9.7
MBD2-202ENST00000398398 AGGF1Q8N302 714 aaeCLIP27.29■■□□□ 1.962e-6■□□□□ 9.4
MBD2-202ENST00000398398 DDX3XO00571 662 aaKnown RBP eCLIP28.91■■■□□ 2.222e-8■□□□□ 8.3
Retrieved 27 of 27 RNA–protein pairs in 7.5 ms