RNA–Protein interactions for RNA: ENST00000398235.6

CHTF8-202, Transcript of chromosome transmission fidelity factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CHTF8, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF8-202ENST00000398235 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
CHTF8-202ENST00000398235 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
CHTF8-202ENST00000398235 ABCC9O60706 1549 aa29.64■■■□□ 2.34
CHTF8-202ENST00000398235 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
CHTF8-202ENST00000398235 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
CHTF8-202ENST00000398235 NACADO15069 1562 aa28.21■■■□□ 2.11
CHTF8-202ENST00000398235 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
CHTF8-202ENST00000398235 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
CHTF8-202ENST00000398235 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
CHTF8-202ENST00000398235 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
CHTF8-202ENST00000398235 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
CHTF8-202ENST00000398235 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
CHTF8-202ENST00000398235 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
CHTF8-202ENST00000398235 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
CHTF8-202ENST00000398235 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
CHTF8-202ENST00000398235 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
CHTF8-202ENST00000398235 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
CHTF8-202ENST00000398235 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
CHTF8-202ENST00000398235 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
CHTF8-202ENST00000398235 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
CHTF8-202ENST00000398235 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
CHTF8-202ENST00000398235 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
CHTF8-202ENST00000398235 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
CHTF8-202ENST00000398235 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
CHTF8-202ENST00000398235 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
CHTF8-202ENST00000398235 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
CHTF8-202ENST00000398235 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
CHTF8-202ENST00000398235 WIZO95785 1651 aa25.81■■□□□ 1.72
CHTF8-202ENST00000398235 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
CHTF8-202ENST00000398235 NESP48681 1621 aa25.57■■□□□ 1.68
CHTF8-202ENST00000398235 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
CHTF8-202ENST00000398235 CUX2O14529 1486 aa25.47■■□□□ 1.67
CHTF8-202ENST00000398235 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
CHTF8-202ENST00000398235 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
CHTF8-202ENST00000398235 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
CHTF8-202ENST00000398235 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
CHTF8-202ENST00000398235 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
CHTF8-202ENST00000398235 THOC2Q8NI27 1593 aaKnown RBP25.21■■□□□ 1.63
CHTF8-202ENST00000398235 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
CHTF8-202ENST00000398235 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.63
CHTF8-202ENST00000398235 CFTRP13569 1480 aa25.15■■□□□ 1.62
CHTF8-202ENST00000398235 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
CHTF8-202ENST00000398235 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
CHTF8-202ENST00000398235 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
CHTF8-202ENST00000398235 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
CHTF8-202ENST00000398235 PRDM2Q13029 1718 aa24.95■■□□□ 1.58
CHTF8-202ENST00000398235 WDR62O43379 1518 aa24.93■■□□□ 1.58
CHTF8-202ENST00000398235 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
CHTF8-202ENST00000398235 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
CHTF8-202ENST00000398235 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
CHTF8-202ENST00000398235 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
CHTF8-202ENST00000398235 CUX1P39880 1505 aa24.46■■□□□ 1.51
CHTF8-202ENST00000398235 IFT140Q96RY7 1462 aa24.45■■□□□ 1.51
CHTF8-202ENST00000398235 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.5
CHTF8-202ENST00000398235 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
CHTF8-202ENST00000398235 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
CHTF8-202ENST00000398235 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
CHTF8-202ENST00000398235 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
CHTF8-202ENST00000398235 OSCARQ8IYS5 282 aa24.33■■□□□ 1.49
CHTF8-202ENST00000398235 SOGA1O94964 1423 aa24.31■■□□□ 1.48
CHTF8-202ENST00000398235 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.48
CHTF8-202ENST00000398235 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
CHTF8-202ENST00000398235 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
CHTF8-202ENST00000398235 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
CHTF8-202ENST00000398235 WRNQ14191 1432 aaPredicted RBP eCLIP24.23■■□□□ 1.47
CHTF8-202ENST00000398235 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
CHTF8-202ENST00000398235 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
CHTF8-202ENST00000398235 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
CHTF8-202ENST00000398235 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
CHTF8-202ENST00000398235 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
CHTF8-202ENST00000398235 CHD1O14646 1710 aa24.03■■□□□ 1.44
CHTF8-202ENST00000398235 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
CHTF8-202ENST00000398235 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
CHTF8-202ENST00000398235 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
CHTF8-202ENST00000398235 GRIN2BQ13224 1484 aa24■■□□□ 1.43
CHTF8-202ENST00000398235 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
CHTF8-202ENST00000398235 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
CHTF8-202ENST00000398235 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
CHTF8-202ENST00000398235 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
CHTF8-202ENST00000398235 FBLN2P98095 1184 aa23.96■■□□□ 1.43
CHTF8-202ENST00000398235 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
CHTF8-202ENST00000398235 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
CHTF8-202ENST00000398235 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
CHTF8-202ENST00000398235 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
CHTF8-202ENST00000398235 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
CHTF8-202ENST00000398235 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
CHTF8-202ENST00000398235 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
CHTF8-202ENST00000398235 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
CHTF8-202ENST00000398235 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
CHTF8-202ENST00000398235 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
CHTF8-202ENST00000398235 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
CHTF8-202ENST00000398235 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
CHTF8-202ENST00000398235 IGF1RP08069 1367 aa23.68■■□□□ 1.38
CHTF8-202ENST00000398235 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
CHTF8-202ENST00000398235 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
CHTF8-202ENST00000398235 NUP160Q12769 1436 aa23.62■■□□□ 1.37
CHTF8-202ENST00000398235 CUL7Q14999 1698 aa23.54■■□□□ 1.36
CHTF8-202ENST00000398235 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
CHTF8-202ENST00000398235 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
CHTF8-202ENST00000398235 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms