RNA–Protein interactions for RNA: ENST00000397916.1

TSPEAR-202, Transcript of thrombospondin type laminin G domain and EAR repeats, humanhuman

TSL 1 (best) BASIC

Gene TSPEAR, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPEAR-202ENST00000397916 NISCHQ9Y2I1 1504 aa36.66■■■■□ 3.46
TSPEAR-202ENST00000397916 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
TSPEAR-202ENST00000397916 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
TSPEAR-202ENST00000397916 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
TSPEAR-202ENST00000397916 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
TSPEAR-202ENST00000397916 ABCC9O60706 1549 aa30.16■■■□□ 2.42
TSPEAR-202ENST00000397916 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
TSPEAR-202ENST00000397916 MYO15BQ96JP2 1530 aa29.9■■■□□ 2.38
TSPEAR-202ENST00000397916 NACADO15069 1562 aa29.7■■■□□ 2.34
TSPEAR-202ENST00000397916 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
TSPEAR-202ENST00000397916 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
TSPEAR-202ENST00000397916 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
TSPEAR-202ENST00000397916 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
TSPEAR-202ENST00000397916 BICRAQ9NZM4 1560 aa28.61■■■□□ 2.17
TSPEAR-202ENST00000397916 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
TSPEAR-202ENST00000397916 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
TSPEAR-202ENST00000397916 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
TSPEAR-202ENST00000397916 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
TSPEAR-202ENST00000397916 BAZ1AQ9NRL2 1556 aaPredicted RBP28.29■■■□□ 2.12
TSPEAR-202ENST00000397916 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
TSPEAR-202ENST00000397916 WIZO95785 1651 aa28.13■■■□□ 2.09
TSPEAR-202ENST00000397916 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
TSPEAR-202ENST00000397916 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
TSPEAR-202ENST00000397916 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
TSPEAR-202ENST00000397916 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.02
TSPEAR-202ENST00000397916 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
TSPEAR-202ENST00000397916 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
TSPEAR-202ENST00000397916 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
TSPEAR-202ENST00000397916 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
TSPEAR-202ENST00000397916 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
TSPEAR-202ENST00000397916 HMGXB3Q12766 1538 aa27.39■■□□□ 1.98
TSPEAR-202ENST00000397916 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
TSPEAR-202ENST00000397916 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
TSPEAR-202ENST00000397916 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
TSPEAR-202ENST00000397916 CFTRP13569 1480 aa26.85■■□□□ 1.89
TSPEAR-202ENST00000397916 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
TSPEAR-202ENST00000397916 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
TSPEAR-202ENST00000397916 PRDM2Q13029 1718 aa26.71■■□□□ 1.87
TSPEAR-202ENST00000397916 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
TSPEAR-202ENST00000397916 DNAJC5BQ9UF47 199 aa26.67■■□□□ 1.86
TSPEAR-202ENST00000397916 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
TSPEAR-202ENST00000397916 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
TSPEAR-202ENST00000397916 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
TSPEAR-202ENST00000397916 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
TSPEAR-202ENST00000397916 NESP48681 1621 aa26.53■■□□□ 1.84
TSPEAR-202ENST00000397916 SOGA1O94964 1423 aa26.51■■□□□ 1.83
TSPEAR-202ENST00000397916 CUX1P39880 1505 aa26.51■■□□□ 1.83
TSPEAR-202ENST00000397916 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
TSPEAR-202ENST00000397916 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
TSPEAR-202ENST00000397916 RUSC2Q8N2Y8 1516 aa26.43■■□□□ 1.82
TSPEAR-202ENST00000397916 EEA1Q15075 1411 aa26.4■■□□□ 1.82
TSPEAR-202ENST00000397916 EHMT2Q96KQ7 1210 aa26.3■■□□□ 1.8
TSPEAR-202ENST00000397916 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
TSPEAR-202ENST00000397916 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
TSPEAR-202ENST00000397916 CEP164Q9UPV0 1460 aa26.26■■□□□ 1.79
TSPEAR-202ENST00000397916 DNMBPQ6XZF7 1577 aa26.21■■□□□ 1.79
TSPEAR-202ENST00000397916 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
TSPEAR-202ENST00000397916 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
TSPEAR-202ENST00000397916 TOPBP1Q92547 1522 aa26.18■■□□□ 1.78
TSPEAR-202ENST00000397916 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
TSPEAR-202ENST00000397916 KIF21BO75037 1637 aa26.09■■□□□ 1.77
TSPEAR-202ENST00000397916 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
TSPEAR-202ENST00000397916 POLA1P09884 1462 aaPredicted RBP26.06■■□□□ 1.76
TSPEAR-202ENST00000397916 GOLGA3Q08378 1498 aa26.06■■□□□ 1.76
TSPEAR-202ENST00000397916 CUX2O14529 1486 aa26.03■■□□□ 1.76
TSPEAR-202ENST00000397916 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
TSPEAR-202ENST00000397916 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
TSPEAR-202ENST00000397916 RAPGEF2Q9Y4G8 1499 aa25.96■■□□□ 1.75
TSPEAR-202ENST00000397916 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
TSPEAR-202ENST00000397916 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
TSPEAR-202ENST00000397916 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
TSPEAR-202ENST00000397916 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
TSPEAR-202ENST00000397916 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
TSPEAR-202ENST00000397916 CEP162Q5TB80 1403 aa25.89■■□□□ 1.73
TSPEAR-202ENST00000397916 IGF1RP08069 1367 aa25.88■■□□□ 1.73
TSPEAR-202ENST00000397916 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
TSPEAR-202ENST00000397916 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
TSPEAR-202ENST00000397916 WDR62O43379 1518 aa25.81■■□□□ 1.72
TSPEAR-202ENST00000397916 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
TSPEAR-202ENST00000397916 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
TSPEAR-202ENST00000397916 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
TSPEAR-202ENST00000397916 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
TSPEAR-202ENST00000397916 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
TSPEAR-202ENST00000397916 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
TSPEAR-202ENST00000397916 CLIP1P30622 1438 aa25.66■■□□□ 1.7
TSPEAR-202ENST00000397916 CUL7Q14999 1698 aa25.64■■□□□ 1.7
TSPEAR-202ENST00000397916 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
TSPEAR-202ENST00000397916 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
TSPEAR-202ENST00000397916 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.68
TSPEAR-202ENST00000397916 RANGAP1P46060 587 aaPredicted RBP25.54■■□□□ 1.68
TSPEAR-202ENST00000397916 PBRM1Q86U86 1689 aa25.54■■□□□ 1.68
TSPEAR-202ENST00000397916 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
TSPEAR-202ENST00000397916 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
TSPEAR-202ENST00000397916 VPS8Q8N3P4 1428 aa25.44■■□□□ 1.66
TSPEAR-202ENST00000397916 EIF4G3O43432 1585 aaKnown RBP25.43■■□□□ 1.66
TSPEAR-202ENST00000397916 ARAP1Q96P48 1450 aa25.43■■□□□ 1.66
TSPEAR-202ENST00000397916 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
TSPEAR-202ENST00000397916 ARHGAP35Q9NRY4 1499 aa25.41■■□□□ 1.66
TSPEAR-202ENST00000397916 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
TSPEAR-202ENST00000397916 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms