RNA–Protein interactions for RNA: ENST00000397778.6

PQLC1-203, Transcript of PQ loop repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PQLC1, Length 2,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-203ENST00000397778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.91■■■□□ 2.061e-9■■■■■ 112.3
PQLC1-203ENST00000397778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.22■■■□□ 2.112e-6■■■■■ 96.1
PQLC1-203ENST00000397778 SF3B1O75533 1304 aaKnown RBP eCLIP26.48■■□□□ 1.837e-7■■■■■ 86
PQLC1-203ENST00000397778 DKC1O60832 514 aaKnown RBP eCLIP27.6■■■□□ 2.011e-10■■■■■ 72.3
PQLC1-203ENST00000397778 AARSP49588 968 aaKnown RBP eCLIP28.43■■■□□ 2.143e-7■■■■■ 72.1
PQLC1-203ENST00000397778 DDX3XO00571 662 aaKnown RBP eCLIP28.31■■■□□ 2.127e-10■■■■■ 44.1
PQLC1-203ENST00000397778 PCBP2Q15366 365 aaKnown RBP eCLIP25.5■■□□□ 1.678e-7■■■■■ 42.6
PQLC1-203ENST00000397778 EWSR1Q01844 656 aaKnown RBP eCLIP22.09■■□□□ 1.132e-10■■■■■ 39.5
PQLC1-203ENST00000397778 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.99■■□□□ 1.594e-7■■■■■ 36.9
PQLC1-203ENST00000397778 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.55■■□□□ 1.368e-8■■■■■ 36
PQLC1-203ENST00000397778 UPF1Q92900 1129 aaKnown RBP eCLIP26.43■■□□□ 1.821e-10■■■■■ 34.5
PQLC1-203ENST00000397778 HNRNPKP61978 463 aaKnown RBP eCLIP23.38■■□□□ 1.335e-7■■■■■ 33.4
PQLC1-203ENST00000397778 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.8■■□□□ 1.561e-7■■■■■ 32.7
PQLC1-203ENST00000397778 SF3B4Q15427 424 aaKnown RBP eCLIP24.1■■□□□ 1.454e-9■■■■■ 31.2
PQLC1-203ENST00000397778 SFPQP23246 707 aaKnown RBP eCLIP29.73■■■□□ 2.356e-8■■■■■ 30.8
PQLC1-203ENST00000397778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.96■□□□□ 0.792e-12■■■■■ 29.3
PQLC1-203ENST00000397778 GTF2F1P35269 517 aaKnown RBP eCLIP30.02■■■□□ 2.44e-7■■■■■ 29.2
PQLC1-203ENST00000397778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.32■■□□□ 1.964e-7■■■■■ 28.8
PQLC1-203ENST00000397778 DDX6P26196 483 aaKnown RBP eCLIP24.82■■□□□ 1.561e-9■■■■■ 28.1
PQLC1-203ENST00000397778 TROVE2P10155 538 aaKnown RBP eCLIP26.82■■□□□ 1.883e-10■■■■□ 25.5
PQLC1-203ENST00000397778 AKAP1Q92667 903 aaKnown RBP eCLIP23.6■■□□□ 1.374e-8■■■■□ 25.1
PQLC1-203ENST00000397778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.45■■■□□ 2.142e-8■■■■□ 25.1
PQLC1-203ENST00000397778 HLTFQ14527 1009 aaKnown RBP eCLIP28.13■■■□□ 2.091e-6■■■■□ 24.6
PQLC1-203ENST00000397778 QKIQ96PU8 341 aaKnown RBP eCLIP26.76■■□□□ 1.873e-6■■■■□ 24.5
PQLC1-203ENST00000397778 NCBP2P52298 156 aaKnown RBP eCLIP24.48■■□□□ 1.512e-7■■■■□ 23.6
PQLC1-203ENST00000397778 RBFOX2O43251 390 aaKnown RBP eCLIP21.28■■□□□ 12e-6■■■■□ 23.4
PQLC1-203ENST00000397778 AQRO60306 1485 aaKnown RBP eCLIP37.65■■■■□ 3.626e-6■■■■□ 23.2
PQLC1-203ENST00000397778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.76■■□□□ 1.871e-6■■■■□ 23.2
PQLC1-203ENST00000397778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.41■■■■□ 3.587e-7■■■■□ 22.8
PQLC1-203ENST00000397778 PRPF4O43172 522 aaKnown RBP eCLIP27.1■■□□□ 1.936e-7■■■■□ 22.7
PQLC1-203ENST00000397778 RBM5P52756 815 aaKnown RBP eCLIP28.75■■■□□ 2.191e-6■■■■□ 22.2
PQLC1-203ENST00000397778 U2AF2P26368 475 aaKnown RBP eCLIP29.98■■■□□ 2.399e-12■■■■□ 20.4
PQLC1-203ENST00000397778 FKBP4Q02790 459 aaKnown RBP eCLIP30.69■■■□□ 2.54e-6■■■■□ 20.2
PQLC1-203ENST00000397778 RBM15Q96T37 977 aaKnown RBP eCLIP27.4■■□□□ 1.983e-7■■■■□ 20.2
PQLC1-203ENST00000397778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.55■■□□□ 1.841e-5■■■■□ 19.8
PQLC1-203ENST00000397778 MATR3P43243 847 aaKnown RBP eCLIP28.6■■■□□ 2.172e-6■■■□□ 19.2
PQLC1-203ENST00000397778 HNRNPMP52272 730 aaKnown RBP eCLIP36.03■■■■□ 3.361e-8■■■□□ 18.3
PQLC1-203ENST00000397778 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.78■■□□□ 1.721e-6■■■□□ 18.1
PQLC1-203ENST00000397778 PTBP1P26599 531 aaKnown RBP eCLIP23.73■■□□□ 1.397e-7■■■□□ 16.6
PQLC1-203ENST00000397778 PCBP1Q15365 356 aaKnown RBP eCLIP26.54■■□□□ 1.844e-6■■■□□ 15.9
PQLC1-203ENST00000397778 NKRFO15226 690 aaKnown RBP eCLIP29.17■■■□□ 2.262e-6■■■□□ 15.4
PQLC1-203ENST00000397778 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.55■■□□□ 1.685e-6■■■□□ 15.4
PQLC1-203ENST00000397778 FUSP35637 526 aaKnown RBP eCLIP16.33■□□□□ 0.29e-7■■■□□ 15.1
PQLC1-203ENST00000397778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.37■■■□□ 2.931e-6■■■□□ 15.1
PQLC1-203ENST00000397778 EFTUD2Q15029 972 aaKnown RBP eCLIP27.24■■□□□ 1.951e-7■■■□□ 14.8
PQLC1-203ENST00000397778 CDC40O60508 579 aaKnown RBP eCLIP23.4■■□□□ 1.345e-6■■□□□ 13
PQLC1-203ENST00000397778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.72■■■□□ 2.031e-6■■□□□ 12.6
PQLC1-203ENST00000397778 EIF3DO15371 548 aaKnown RBP eCLIP28.24■■■□□ 2.113e-6■■□□□ 12.5
PQLC1-203ENST00000397778 GRSF1Q12849 480 aaKnown RBP eCLIP25.08■■□□□ 1.612e-6■■□□□ 12.5
PQLC1-203ENST00000397778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.47■■□□□ 1.997e-12■■□□□ 11.8
PQLC1-203ENST00000397778 FTOQ9C0B1 505 aaKnown RBP eCLIP30.62■■■□□ 2.493e-6■■□□□ 11.4
PQLC1-203ENST00000397778 PPIGQ13427 754 aaKnown RBP eCLIP24.81■■□□□ 1.561e-6■□□□□ 11.2
PQLC1-203ENST00000397778 ILF3Q12906 894 aaKnown RBP eCLIP23.95■■□□□ 1.426e-6■□□□□ 10.2
PQLC1-203ENST00000397778 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.13■■■□□ 2.091e-6■□□□□ 8.5
Retrieved 54 of 54 RNA–protein pairs in 13.9 ms