RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
HMBOX1-203ENST00000397358 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
HMBOX1-203ENST00000397358 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
HMBOX1-203ENST00000397358 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
HMBOX1-203ENST00000397358 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
HMBOX1-203ENST00000397358 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
HMBOX1-203ENST00000397358 CCDC180Q9P1Z9 1646 aa21.68■■□□□ 1.06
HMBOX1-203ENST00000397358 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
HMBOX1-203ENST00000397358 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.05
HMBOX1-203ENST00000397358 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
HMBOX1-203ENST00000397358 HRCP23327 699 aa21.43■■□□□ 1.02
HMBOX1-203ENST00000397358 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
HMBOX1-203ENST00000397358 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
HMBOX1-203ENST00000397358 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
HMBOX1-203ENST00000397358 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
HMBOX1-203ENST00000397358 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
HMBOX1-203ENST00000397358 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
HMBOX1-203ENST00000397358 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
HMBOX1-203ENST00000397358 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
HMBOX1-203ENST00000397358 ABCC9O60706 1549 aa20.77■□□□□ 0.91
HMBOX1-203ENST00000397358 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
HMBOX1-203ENST00000397358 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
HMBOX1-203ENST00000397358 ZEB1P37275 1124 aaPredicted RBP20.51■□□□□ 0.87
HMBOX1-203ENST00000397358 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
HMBOX1-203ENST00000397358 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
HMBOX1-203ENST00000397358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.84
HMBOX1-203ENST00000397358 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
HMBOX1-203ENST00000397358 NACADO15069 1562 aa20.25■□□□□ 0.83
HMBOX1-203ENST00000397358 WIZO95785 1651 aa20.21■□□□□ 0.83
HMBOX1-203ENST00000397358 UBTFP17480 764 aaKnown RBP20.2■□□□□ 0.82
HMBOX1-203ENST00000397358 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
HMBOX1-203ENST00000397358 RANGAP1P46060 587 aaPredicted RBP20.08■□□□□ 0.81
HMBOX1-203ENST00000397358 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
HMBOX1-203ENST00000397358 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
HMBOX1-203ENST00000397358 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
HMBOX1-203ENST00000397358 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
HMBOX1-203ENST00000397358 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
HMBOX1-203ENST00000397358 SOGA1O94964 1423 aa19.9■□□□□ 0.78
HMBOX1-203ENST00000397358 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
HMBOX1-203ENST00000397358 DIEXFQ68CQ4 756 aaKnown RBP19.87■□□□□ 0.77
HMBOX1-203ENST00000397358 CEP162Q5TB80 1403 aa19.84■□□□□ 0.77
HMBOX1-203ENST00000397358 APLP2Q06481 763 aa19.82■□□□□ 0.76
HMBOX1-203ENST00000397358 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
HMBOX1-203ENST00000397358 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.75
HMBOX1-203ENST00000397358 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
HMBOX1-203ENST00000397358 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
HMBOX1-203ENST00000397358 TNIKQ9UKE5 1360 aa19.71■□□□□ 0.75
HMBOX1-203ENST00000397358 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
HMBOX1-203ENST00000397358 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
HMBOX1-203ENST00000397358 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
HMBOX1-203ENST00000397358 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
HMBOX1-203ENST00000397358 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
HMBOX1-203ENST00000397358 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
HMBOX1-203ENST00000397358 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
HMBOX1-203ENST00000397358 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
HMBOX1-203ENST00000397358 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
HMBOX1-203ENST00000397358 EEA1Q15075 1411 aa19.57■□□□□ 0.72
HMBOX1-203ENST00000397358 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
HMBOX1-203ENST00000397358 CLIP1P30622 1438 aa19.51■□□□□ 0.71
HMBOX1-203ENST00000397358 ITGAEP38570 1179 aa19.44■□□□□ 0.7
HMBOX1-203ENST00000397358 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
HMBOX1-203ENST00000397358 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
HMBOX1-203ENST00000397358 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
HMBOX1-203ENST00000397358 MIER1Q8N108 512 aa19.4■□□□□ 0.7
HMBOX1-203ENST00000397358 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
HMBOX1-203ENST00000397358 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
HMBOX1-203ENST00000397358 SYNJ1O43426 1573 aa19.33■□□□□ 0.68
HMBOX1-203ENST00000397358 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
HMBOX1-203ENST00000397358 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
HMBOX1-203ENST00000397358 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
HMBOX1-203ENST00000397358 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
HMBOX1-203ENST00000397358 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
HMBOX1-203ENST00000397358 KIF21BO75037 1637 aa19.13■□□□□ 0.65
HMBOX1-203ENST00000397358 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.64
HMBOX1-203ENST00000397358 FAM50AQ14320 339 aaKnown RBP19.06■□□□□ 0.64
HMBOX1-203ENST00000397358 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
HMBOX1-203ENST00000397358 DHX57Q6P158 1386 aaKnown RBP18.99■□□□□ 0.63
HMBOX1-203ENST00000397358 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
HMBOX1-203ENST00000397358 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
HMBOX1-203ENST00000397358 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
HMBOX1-203ENST00000397358 CCNB3Q8WWL7 1395 aa18.92■□□□□ 0.62
HMBOX1-203ENST00000397358 CUX2O14529 1486 aa18.89■□□□□ 0.62
HMBOX1-203ENST00000397358 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
HMBOX1-203ENST00000397358 CUX1P39880 1505 aa18.88■□□□□ 0.61
HMBOX1-203ENST00000397358 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
HMBOX1-203ENST00000397358 SIN3AQ96ST3 1273 aa18.86■□□□□ 0.61
HMBOX1-203ENST00000397358 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
HMBOX1-203ENST00000397358 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
HMBOX1-203ENST00000397358 CARMIL1Q5VZK9 1371 aa18.82■□□□□ 0.6
HMBOX1-203ENST00000397358 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
HMBOX1-203ENST00000397358 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
HMBOX1-203ENST00000397358 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
HMBOX1-203ENST00000397358 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
HMBOX1-203ENST00000397358 IGF1RP08069 1367 aa18.79■□□□□ 0.6
HMBOX1-203ENST00000397358 BCANQ96GW7 911 aa18.79■□□□□ 0.6
HMBOX1-203ENST00000397358 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
HMBOX1-203ENST00000397358 CFTRP13569 1480 aa18.75■□□□□ 0.59
HMBOX1-203ENST00000397358 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
HMBOX1-203ENST00000397358 SUPT16HQ9Y5B9 1047 aaKnown RBP18.72■□□□□ 0.59
HMBOX1-203ENST00000397358 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 261.2 ms