RNA–Protein interactions for RNA: ENST00000397278.7

APOL1-202, Transcript of apolipoprotein L1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOL1, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-202ENST00000397278 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.693e-30■■■■■ 138.3
APOL1-202ENST00000397278 RPS3P23396 243 aaKnown RBP eCLIP10.1□□□□□ -0.791e-7■■■■■ 49.3
APOL1-202ENST00000397278 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.589e-8■■■■■ 48.4
APOL1-202ENST00000397278 AKAP1Q92667 903 aaKnown RBP eCLIP9.57□□□□□ -0.887e-16■■■■■ 43.8
APOL1-202ENST00000397278 ZC3H11AO75152 810 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■■ 37.4
APOL1-202ENST00000397278 QKIQ96PU8 341 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■■■■□ 26.6
APOL1-202ENST00000397278 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.06□□□□□ -0.481e-7■■■■□ 25.8
APOL1-202ENST00000397278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.762e-6■■■■□ 22.2
APOL1-202ENST00000397278 EFTUD2Q15029 972 aaKnown RBP eCLIP10.84□□□□□ -0.679e-7■■■■□ 22
APOL1-202ENST00000397278 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.612e-10■■■■□ 20.8
APOL1-202ENST00000397278 FUSP35637 526 aaKnown RBP eCLIP6.56□□□□□ -1.365e-6■■■■□ 20.6
APOL1-202ENST00000397278 ILF3Q12906 894 aaKnown RBP eCLIP9.6□□□□□ -0.879e-9■■■■□ 20.2
APOL1-202ENST00000397278 NOLC1Q14978 699 aaKnown RBP eCLIP12.28□□□□□ -0.443e-6■■■■□ 19.6
APOL1-202ENST00000397278 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.275e-7■■■□□ 19.1
APOL1-202ENST00000397278 DKC1O60832 514 aaKnown RBP eCLIP11.02□□□□□ -0.653e-17■■■□□ 19
APOL1-202ENST00000397278 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 03e-6■■■□□ 17
APOL1-202ENST00000397278 TAF15Q92804 592 aaKnown RBP eCLIP8.63□□□□□ -1.033e-6■■■□□ 16.5
APOL1-202ENST00000397278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.04□□□□□ -0.648e-9■■■□□ 16.5
APOL1-202ENST00000397278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.123e-8■■□□□ 13.5
APOL1-202ENST00000397278 RBM22Q9NW64 420 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■□□□ 13
APOL1-202ENST00000397278 GRSF1Q12849 480 aaKnown RBP eCLIP10.1□□□□□ -0.799e-12■■□□□ 12.9
APOL1-202ENST00000397278 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.463e-6■■□□□ 12.8
APOL1-202ENST00000397278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.119e-7■■□□□ 12.6
APOL1-202ENST00000397278 PRPF4O43172 522 aaKnown RBP eCLIP10.76□□□□□ -0.697e-12■■□□□ 12.1
APOL1-202ENST00000397278 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.622e-6■■□□□ 11.4
APOL1-202ENST00000397278 PPIGQ13427 754 aaKnown RBP eCLIP9.87□□□□□ -0.831e-13■□□□□ 10.8
APOL1-202ENST00000397278 LARP4Q71RC2 724 aaKnown RBP eCLIP10.27□□□□□ -0.775e-7■□□□□ 10.7
APOL1-202ENST00000397278 RBM5P52756 815 aaKnown RBP eCLIP11.56□□□□□ -0.566e-7■□□□□ 10.3
APOL1-202ENST00000397278 TROVE2P10155 538 aaKnown RBP eCLIP10.71□□□□□ -0.74e-8■□□□□ 10.2
APOL1-202ENST00000397278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.02□□□□□ -0.658e-36■□□□□ 9.6
APOL1-202ENST00000397278 TIAL1Q01085 375 aaKnown RBP eCLIP10.32□□□□□ -0.762e-6■□□□□ 9.5
APOL1-202ENST00000397278 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.413e-8■□□□□ 9.4
APOL1-202ENST00000397278 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■□□□□ 8.8
Retrieved 33 of 33 RNA–protein pairs in 7.7 ms