RNA–Protein interactions for RNA: ENST00000397100.6

C7orf50-203, Transcript of chromosome 7 open reading frame 50, humanhuman

APPRIS P2 TSL 3 BASIC

Gene C7orf50, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C7orf50-203ENST00000397100 UPF1Q92900 1129 aaKnown RBP eCLIP24.88■■□□□ 1.572e-10■■■■■ 32
C7orf50-203ENST00000397100 DDX3XO00571 662 aaKnown RBP eCLIP19.91■□□□□ 0.782e-9■■■□□ 16.5
C7orf50-203ENST00000397100 LARP4Q71RC2 724 aaKnown RBP eCLIP17.98■□□□□ 0.474e-9■■■■□ 20.2
C7orf50-203ENST00000397100 PABPC4Q13310 644 aaKnown RBP eCLIP21.96■■□□□ 1.116e-9■■■■□ 24
C7orf50-203ENST00000397100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.88■□□□□ 0.619e-9■■■■■ 27.2
C7orf50-203ENST00000397100 EFTUD2Q15029 972 aaKnown RBP eCLIP18.61■□□□□ 0.571e-8■■■□□ 18.3
C7orf50-203ENST00000397100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.88■■□□□ 1.572e-8■■□□□ 13
C7orf50-203ENST00000397100 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.43■□□□□ 0.062e-8■■■■□ 19.6
C7orf50-203ENST00000397100 GTF2F1P35269 517 aaKnown RBP eCLIP20.03■□□□□ 0.83e-8■■■■□ 24.4
C7orf50-203ENST00000397100 FTOQ9C0B1 505 aaKnown RBP eCLIP21.24■□□□□ 0.993e-8■□□□□ 9.8
C7orf50-203ENST00000397100 PPIGQ13427 754 aaKnown RBP eCLIP20.77■□□□□ 0.923e-8■□□□□ 9.6
C7orf50-203ENST00000397100 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.83■□□□□ 0.775e-8■■■■□ 26.2
C7orf50-203ENST00000397100 SRSF7Q16629 238 aaKnown RBP eCLIP15.71■□□□□ 0.116e-8■■■■□ 19.9
C7orf50-203ENST00000397100 FKBP4Q02790 459 aaKnown RBP eCLIP23.3■■□□□ 1.327e-8■■■■■ 33.2
C7orf50-203ENST00000397100 DDX6P26196 483 aaKnown RBP eCLIP19.63■□□□□ 0.731e-7■■■■■ 60.9
C7orf50-203ENST00000397100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.03■■■□□ 2.081e-7■□□□□ 10.9
C7orf50-203ENST00000397100 AATFQ9NY61 560 aaKnown RBP eCLIP22.52■■□□□ 1.21e-7■■■■■ 105.3
C7orf50-203ENST00000397100 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■■■■ 27.3
C7orf50-203ENST00000397100 HNRNPKP61978 463 aaKnown RBP eCLIP18.48■□□□□ 0.552e-7■■■■□ 25.2
C7orf50-203ENST00000397100 DKC1O60832 514 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■■■■ 55.7
C7orf50-203ENST00000397100 RBFOX2O43251 390 aaKnown RBP eCLIP15.26■□□□□ 0.033e-7■■■■■ 99.4
C7orf50-203ENST00000397100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.3■■□□□ 1.163e-7■■■■■ 36.9
C7orf50-203ENST00000397100 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.62■□□□□ 0.733e-7■■■■■ 42
C7orf50-203ENST00000397100 AGGF1Q8N302 714 aaeCLIP18.8■□□□□ 0.64e-7■■■■■ 28.6
C7orf50-203ENST00000397100 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.16■□□□□ 0.665e-7■■■■■ 69.6
C7orf50-203ENST00000397100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.68■■■□□ 2.187e-7■■■■■ 45.1
C7orf50-203ENST00000397100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.05■□□□□ 0.87e-7■■■■■ 203.3
C7orf50-203ENST00000397100 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.24■□□□□ 0.359e-7■■■□□ 18.3
C7orf50-203ENST00000397100 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.7■□□□□ 0.749e-7■■■■□ 22.3
C7orf50-203ENST00000397100 PCBP2Q15366 365 aaKnown RBP eCLIP18.29■□□□□ 0.529e-7■■■■■ 27.9
C7orf50-203ENST00000397100 PCBP1Q15365 356 aaKnown RBP eCLIP20.72■□□□□ 0.919e-7■■■■■ 40.2
C7orf50-203ENST00000397100 RBM22Q9NW64 420 aaKnown RBP eCLIP19.14■□□□□ 0.659e-7■■■■□ 21.6
C7orf50-203ENST00000397100 ILF3Q12906 894 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■■□ 23.2
C7orf50-203ENST00000397100 YWHAGP61981 247 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■■■■ 30.3
C7orf50-203ENST00000397100 EIF4G2P78344 907 aaKnown RBP eCLIP26.53■■□□□ 1.841e-6■■■■■ 38.9
C7orf50-203ENST00000397100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.58■□□□□ 0.721e-6■■■■■ 28.2
C7orf50-203ENST00000397100 NKRFO15226 690 aaKnown RBP eCLIP21.22■□□□□ 0.991e-6■■■□□ 15
C7orf50-203ENST00000397100 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.35■□□□□ 0.851e-6■■■□□ 18.1
C7orf50-203ENST00000397100 SF3A3Q12874 501 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■■□ 21.5
C7orf50-203ENST00000397100 SFPQP23246 707 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■■■□ 22.6
C7orf50-203ENST00000397100 HNRNPMP52272 730 aaKnown RBP eCLIP28.8■■■□□ 2.21e-6■■■■■ 29.9
C7orf50-203ENST00000397100 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■■■■ 83.4
C7orf50-203ENST00000397100 MATR3P43243 847 aaKnown RBP eCLIP20.52■□□□□ 0.882e-6■■■■□ 26.1
C7orf50-203ENST00000397100 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■■ 163.7
C7orf50-203ENST00000397100 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.94■□□□□ 0.782e-6■■■■■ 55.4
C7orf50-203ENST00000397100 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.18■■□□□ 1.142e-6■■■■■ 26.8
C7orf50-203ENST00000397100 TIA1P31483 386 aaKnown RBP eCLIP17.89■□□□□ 0.452e-6■■□□□ 12.3
C7orf50-203ENST00000397100 EWSR1Q01844 656 aaKnown RBP eCLIP14.77□□□□□ -0.052e-6■■■■□ 23.9
C7orf50-203ENST00000397100 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■■□□ 16.5
C7orf50-203ENST00000397100 NPM1P06748 294 aaKnown RBP eCLIP30.07■■■□□ 2.42e-6■■■■■ 46
C7orf50-203ENST00000397100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.57■■□□□ 1.042e-6■■■■■ 54.1
C7orf50-203ENST00000397100 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■□□ 18.6
C7orf50-203ENST00000397100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.41■■■□□ 2.32e-6■■■■■ 26.8
C7orf50-203ENST00000397100 NONOQ15233 471 aaKnown RBP eCLIP21.48■■□□□ 1.032e-6■■■□□ 17.1
C7orf50-203ENST00000397100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.3■■□□□ 1.163e-6■□□□□ 10.7
C7orf50-203ENST00000397100 METAP2P50579 478 aaKnown RBP eCLIP21.94■■□□□ 1.13e-6■■□□□ 14.3
C7orf50-203ENST00000397100 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■□□ 18.5
C7orf50-203ENST00000397100 TROVE2P10155 538 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■□□□ 12.5
C7orf50-203ENST00000397100 RBM5P52756 815 aaKnown RBP eCLIP22.71■■□□□ 1.233e-6■■■□□ 19.1
C7orf50-203ENST00000397100 PRPF4O43172 522 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■■□□ 15.7
C7orf50-203ENST00000397100 NIPBLQ6KC79 2804 aaeCLIP15.38■□□□□ 0.053e-6■■■□□ 14.8
C7orf50-203ENST00000397100 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.4■■□□□ 1.023e-6■■■■□ 26.1
C7orf50-203ENST00000397100 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.77■■□□□ 1.723e-6■□□□□ 10.1
C7orf50-203ENST00000397100 SF3B1O75533 1304 aaKnown RBP eCLIP20.15■□□□□ 0.824e-6■■■■■ 150.9
C7orf50-203ENST00000397100 AARSP49588 968 aaKnown RBP eCLIP20.12■□□□□ 0.814e-6■■■■■ 72.6
C7orf50-203ENST00000397100 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.78■■□□□ 1.244e-6■■■□□ 18.8
C7orf50-203ENST00000397100 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.48■□□□□ 0.394e-6■■■□□ 16.5
C7orf50-203ENST00000397100 NCBP2P52298 156 aaKnown RBP eCLIP17.64■□□□□ 0.414e-6■■■■□ 21.3
C7orf50-203ENST00000397100 QKIQ96PU8 341 aaKnown RBP eCLIP19.25■□□□□ 0.675e-6■■■□□ 16.5
C7orf50-203ENST00000397100 EIF3DO15371 548 aaKnown RBP eCLIP20.76■□□□□ 0.915e-6■■□□□ 14.4
C7orf50-203ENST00000397100 AKAP1Q92667 903 aaKnown RBP eCLIP16.3■□□□□ 0.25e-6■■■■□ 19.5
C7orf50-203ENST00000397100 LSM11P83369 360 aaKnown RBP eCLIP16.88■□□□□ 0.297e-6■■■■□ 21.1
C7orf50-203ENST00000397100 CSTF2P33240 577 aaKnown RBP eCLIP18.01■□□□□ 0.479e-6■■■□□ 16.6
Retrieved 73 of 73 RNA–protein pairs in 13.8 ms