RNA–Protein interactions for RNA: ENST00000396777.7

ARFIP2-202, Transcript of ADP ribosylation factor interacting protein 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARFIP2, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP2-202ENST00000396777 QKIQ96PU8 341 aaKnown RBP eCLIP23.75■■□□□ 1.393e-11■■■■■ 38.5
ARFIP2-202ENST00000396777 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.73■■□□□ 1.392e-10■■■□□ 14.8
ARFIP2-202ENST00000396777 SRSF1Q07955 248 aaKnown RBP eCLIP18.49■□□□□ 0.558e-10■■■□□ 17.6
ARFIP2-202ENST00000396777 DDX3XO00571 662 aaKnown RBP eCLIP24.8■■□□□ 1.561e-9■■■□□ 17
ARFIP2-202ENST00000396777 EFTUD2Q15029 972 aaKnown RBP eCLIP23.47■■□□□ 1.355e-9■■■■■ 69.9
ARFIP2-202ENST00000396777 SRSF9Q13242 221 aaKnown RBP eCLIP15.83■□□□□ 0.129e-9■■■■■ 28
ARFIP2-202ENST00000396777 SF3A3Q12874 501 aaKnown RBP eCLIP23.07■■□□□ 1.285e-8■■■■■ 36.3
ARFIP2-202ENST00000396777 PPIGQ13427 754 aaKnown RBP eCLIP23.46■■□□□ 1.351e-7■■■■□ 20.3
ARFIP2-202ENST00000396777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.67■■■□□ 2.823e-7■■■■□ 24.2
ARFIP2-202ENST00000396777 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.46■■□□□ 1.515e-7■■□□□ 13.8
ARFIP2-202ENST00000396777 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.7■■□□□ 1.546e-7■■■■■ 193.5
ARFIP2-202ENST00000396777 AQRO60306 1485 aaKnown RBP eCLIP35.7■■■■□ 3.318e-7■■■■□ 21.3
ARFIP2-202ENST00000396777 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■■■■□ 22.5
ARFIP2-202ENST00000396777 RBM15Q96T37 977 aaKnown RBP eCLIP23.79■■□□□ 1.42e-6■■■□□ 18.6
ARFIP2-202ENST00000396777 LSM11P83369 360 aaKnown RBP eCLIP21.22■□□□□ 0.992e-6■■□□□ 13.1
ARFIP2-202ENST00000396777 WDR43Q15061 677 aaKnown RBP eCLIP30.68■■■□□ 2.52e-6■■■■■ 54.5
ARFIP2-202ENST00000396777 SF3B4Q15427 424 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■■■□ 26.7
ARFIP2-202ENST00000396777 GPKOWQ92917 476 aaPredicted RBP eCLIP26.31■■□□□ 1.82e-6■□□□□ 8.7
ARFIP2-202ENST00000396777 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.47■■□□□ 1.673e-6■■□□□ 12.5
ARFIP2-202ENST00000396777 SF3B1O75533 1304 aaKnown RBP eCLIP23.82■■□□□ 1.43e-6■■■■■ 87.6
ARFIP2-202ENST00000396777 PABPC4Q13310 644 aaKnown RBP eCLIP25.53■■□□□ 1.684e-6■■□□□ 11.9
ARFIP2-202ENST00000396777 HNRNPKP61978 463 aaKnown RBP eCLIP21.74■■□□□ 1.076e-6■■■□□ 16.5
ARFIP2-202ENST00000396777 U2AF2P26368 475 aaKnown RBP eCLIP26.61■■□□□ 1.856e-6■■■■□ 22.5
Retrieved 23 of 23 RNA–protein pairs in 6.6 ms