RNA–Protein interactions for RNA: ENST00000396398.7

NAGA-201, Transcript of alpha-N-acetylgalactosaminidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NAGA, Length 3,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAGA-201ENST00000396398 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
NAGA-201ENST00000396398 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
NAGA-201ENST00000396398 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
NAGA-201ENST00000396398 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
NAGA-201ENST00000396398 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
NAGA-201ENST00000396398 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
NAGA-201ENST00000396398 ABCC9O60706 1549 aa19.92■□□□□ 0.78
NAGA-201ENST00000396398 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
NAGA-201ENST00000396398 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
NAGA-201ENST00000396398 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
NAGA-201ENST00000396398 PCGF6Q9BYE7 350 aa19.65■□□□□ 0.74
NAGA-201ENST00000396398 HRCP23327 699 aa19.63■□□□□ 0.73
NAGA-201ENST00000396398 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
NAGA-201ENST00000396398 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
NAGA-201ENST00000396398 NACADO15069 1562 aa19.35■□□□□ 0.69
NAGA-201ENST00000396398 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
NAGA-201ENST00000396398 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
NAGA-201ENST00000396398 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
NAGA-201ENST00000396398 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
NAGA-201ENST00000396398 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
NAGA-201ENST00000396398 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
NAGA-201ENST00000396398 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
NAGA-201ENST00000396398 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
NAGA-201ENST00000396398 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
NAGA-201ENST00000396398 WIZO95785 1651 aa18.91■□□□□ 0.62
NAGA-201ENST00000396398 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
NAGA-201ENST00000396398 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
NAGA-201ENST00000396398 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
NAGA-201ENST00000396398 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
NAGA-201ENST00000396398 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
NAGA-201ENST00000396398 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
NAGA-201ENST00000396398 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
NAGA-201ENST00000396398 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
NAGA-201ENST00000396398 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
NAGA-201ENST00000396398 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
NAGA-201ENST00000396398 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.56
NAGA-201ENST00000396398 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
NAGA-201ENST00000396398 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
NAGA-201ENST00000396398 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
NAGA-201ENST00000396398 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
NAGA-201ENST00000396398 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
NAGA-201ENST00000396398 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
NAGA-201ENST00000396398 SOGA1O94964 1423 aa18.34■□□□□ 0.53
NAGA-201ENST00000396398 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
NAGA-201ENST00000396398 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
NAGA-201ENST00000396398 NEUROD1Q13562 356 aa18.24■□□□□ 0.51
NAGA-201ENST00000396398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
NAGA-201ENST00000396398 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
NAGA-201ENST00000396398 GTF3C3Q9Y5Q9 886 aa18.22■□□□□ 0.51
NAGA-201ENST00000396398 RUSC2Q8N2Y8 1516 aa18.22■□□□□ 0.51
NAGA-201ENST00000396398 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
NAGA-201ENST00000396398 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
NAGA-201ENST00000396398 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
NAGA-201ENST00000396398 APLP2Q06481 763 aa18.13■□□□□ 0.49
NAGA-201ENST00000396398 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
NAGA-201ENST00000396398 EEA1Q15075 1411 aa18.1■□□□□ 0.49
NAGA-201ENST00000396398 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
NAGA-201ENST00000396398 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
NAGA-201ENST00000396398 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
NAGA-201ENST00000396398 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
NAGA-201ENST00000396398 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
NAGA-201ENST00000396398 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
NAGA-201ENST00000396398 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
NAGA-201ENST00000396398 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
NAGA-201ENST00000396398 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
NAGA-201ENST00000396398 CLIP1P30622 1438 aa17.93■□□□□ 0.46
NAGA-201ENST00000396398 MYT1Q01538 1121 aa17.89■□□□□ 0.45
NAGA-201ENST00000396398 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
NAGA-201ENST00000396398 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
NAGA-201ENST00000396398 ATP1B4Q9UN42 357 aaPredicted RBP17.81■□□□□ 0.44
NAGA-201ENST00000396398 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
NAGA-201ENST00000396398 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
NAGA-201ENST00000396398 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
NAGA-201ENST00000396398 CFTRP13569 1480 aa17.74■□□□□ 0.43
NAGA-201ENST00000396398 CUX1P39880 1505 aa17.73■□□□□ 0.43
NAGA-201ENST00000396398 KIF21BO75037 1637 aa17.72■□□□□ 0.43
NAGA-201ENST00000396398 ITGAEP38570 1179 aa17.71■□□□□ 0.43
NAGA-201ENST00000396398 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
NAGA-201ENST00000396398 CUX2O14529 1486 aa17.7■□□□□ 0.42
NAGA-201ENST00000396398 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
NAGA-201ENST00000396398 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
NAGA-201ENST00000396398 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
NAGA-201ENST00000396398 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
NAGA-201ENST00000396398 MIER1Q8N108 512 aa17.58■□□□□ 0.4
NAGA-201ENST00000396398 PRXQ9BXM0 1461 aa17.57■□□□□ 0.4
NAGA-201ENST00000396398 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
NAGA-201ENST00000396398 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
NAGA-201ENST00000396398 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
NAGA-201ENST00000396398 CARMIL1Q5VZK9 1371 aa17.56■□□□□ 0.4
NAGA-201ENST00000396398 NESP48681 1621 aa17.56■□□□□ 0.4
NAGA-201ENST00000396398 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
NAGA-201ENST00000396398 IGF1RP08069 1367 aa17.52■□□□□ 0.4
NAGA-201ENST00000396398 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
NAGA-201ENST00000396398 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
NAGA-201ENST00000396398 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
NAGA-201ENST00000396398 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
NAGA-201ENST00000396398 TDRD9Q8NDG6 1382 aaKnown RBP17.42■□□□□ 0.38
NAGA-201ENST00000396398 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.38
NAGA-201ENST00000396398 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
NAGA-201ENST00000396398 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms