RNA–Protein interactions for RNA: ENST00000396252.6

NBN-202, Transcript of nibrin, humanhuman

TSL 5

Gene NBN, Length 4,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBN-202ENST00000396252 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.76
NBN-202ENST00000396252 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
NBN-202ENST00000396252 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
NBN-202ENST00000396252 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
NBN-202ENST00000396252 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
NBN-202ENST00000396252 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
NBN-202ENST00000396252 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
NBN-202ENST00000396252 TTBK1Q5TCY1 1321 aaPredicted RBP17.88■□□□□ 0.45
NBN-202ENST00000396252 APLP2Q06481 763 aa17.87■□□□□ 0.45
NBN-202ENST00000396252 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
NBN-202ENST00000396252 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
NBN-202ENST00000396252 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
NBN-202ENST00000396252 CCER1Q8TC90 406 aaPredicted RBP17.64■□□□□ 0.41
NBN-202ENST00000396252 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
NBN-202ENST00000396252 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
NBN-202ENST00000396252 HRCP23327 699 aa17.51■□□□□ 0.39
NBN-202ENST00000396252 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
NBN-202ENST00000396252 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
NBN-202ENST00000396252 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
NBN-202ENST00000396252 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
NBN-202ENST00000396252 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
NBN-202ENST00000396252 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.36
NBN-202ENST00000396252 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
NBN-202ENST00000396252 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
NBN-202ENST00000396252 NEFLP07196 543 aa17■□□□□ 0.31
NBN-202ENST00000396252 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
NBN-202ENST00000396252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
NBN-202ENST00000396252 ITGAEP38570 1179 aa16.92■□□□□ 0.3
NBN-202ENST00000396252 MYT1Q01538 1121 aa16.86■□□□□ 0.29
NBN-202ENST00000396252 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
NBN-202ENST00000396252 ABCC9O60706 1549 aa16.58■□□□□ 0.24
NBN-202ENST00000396252 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
NBN-202ENST00000396252 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
NBN-202ENST00000396252 CNGB1Q14028 1251 aaPredicted RBP16.52■□□□□ 0.24
NBN-202ENST00000396252 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
NBN-202ENST00000396252 FAM50AQ14320 339 aaKnown RBP16.46■□□□□ 0.23
NBN-202ENST00000396252 ZNF316A6NFI3 1004 aaPredicted RBP16.43■□□□□ 0.22
NBN-202ENST00000396252 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
NBN-202ENST00000396252 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
NBN-202ENST00000396252 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
NBN-202ENST00000396252 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
NBN-202ENST00000396252 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
NBN-202ENST00000396252 BCANQ96GW7 911 aa16.34■□□□□ 0.21
NBN-202ENST00000396252 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
NBN-202ENST00000396252 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
NBN-202ENST00000396252 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
NBN-202ENST00000396252 ANP32CO43423 234 aa16.22■□□□□ 0.19
NBN-202ENST00000396252 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
NBN-202ENST00000396252 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
NBN-202ENST00000396252 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
NBN-202ENST00000396252 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
NBN-202ENST00000396252 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
NBN-202ENST00000396252 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
NBN-202ENST00000396252 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
NBN-202ENST00000396252 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
NBN-202ENST00000396252 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
NBN-202ENST00000396252 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
NBN-202ENST00000396252 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.15
NBN-202ENST00000396252 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
NBN-202ENST00000396252 FKBP8Q14318 412 aa15.94■□□□□ 0.14
NBN-202ENST00000396252 MIER1Q8N108 512 aa15.93■□□□□ 0.14
NBN-202ENST00000396252 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
NBN-202ENST00000396252 FBLN2P98095 1184 aa15.91■□□□□ 0.14
NBN-202ENST00000396252 TONSLQ96HA7 1378 aa15.88■□□□□ 0.13
NBN-202ENST00000396252 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
NBN-202ENST00000396252 CLIP1P30622 1438 aa15.84■□□□□ 0.13
NBN-202ENST00000396252 ZNF777Q9ULD5 760 aaPredicted RBP15.82■□□□□ 0.12
NBN-202ENST00000396252 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
NBN-202ENST00000396252 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
NBN-202ENST00000396252 HIRIP3Q9BW71 556 aaPredicted RBP15.75■□□□□ 0.11
NBN-202ENST00000396252 ANP32AP39687 249 aaKnown RBP15.75■□□□□ 0.11
NBN-202ENST00000396252 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
NBN-202ENST00000396252 EEA1Q15075 1411 aa15.71■□□□□ 0.11
NBN-202ENST00000396252 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.1
NBN-202ENST00000396252 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
NBN-202ENST00000396252 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
NBN-202ENST00000396252 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
NBN-202ENST00000396252 SALL2Q9Y467 1007 aaPredicted RBP15.64■□□□□ 0.09
NBN-202ENST00000396252 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.09
NBN-202ENST00000396252 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
NBN-202ENST00000396252 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
NBN-202ENST00000396252 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
NBN-202ENST00000396252 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
NBN-202ENST00000396252 TMC1Q8TDI8 760 aa15.59■□□□□ 0.09
NBN-202ENST00000396252 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.09
NBN-202ENST00000396252 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
NBN-202ENST00000396252 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
NBN-202ENST00000396252 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
NBN-202ENST00000396252 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
NBN-202ENST00000396252 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.08
NBN-202ENST00000396252 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
NBN-202ENST00000396252 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
NBN-202ENST00000396252 NEFMP07197 916 aa15.49■□□□□ 0.07
NBN-202ENST00000396252 NBR1Q14596 966 aa15.49■□□□□ 0.07
NBN-202ENST00000396252 SOGA1O94964 1423 aa15.48■□□□□ 0.07
NBN-202ENST00000396252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
NBN-202ENST00000396252 NACADO15069 1562 aa15.48■□□□□ 0.07
NBN-202ENST00000396252 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
NBN-202ENST00000396252 TSPY4P0CV99 314 aa15.47■□□□□ 0.07
NBN-202ENST00000396252 TSPY10P0CW01 314 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms