RNA–Protein interactions for RNA: ENST00000395849.6

NCOR1-203, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 3,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-203ENST00000395849 NISCHQ9Y2I1 1504 aa18.34■□□□□ 0.53
NCOR1-203ENST00000395849 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
NCOR1-203ENST00000395849 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
NCOR1-203ENST00000395849 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
NCOR1-203ENST00000395849 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
NCOR1-203ENST00000395849 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
NCOR1-203ENST00000395849 ABCC9O60706 1549 aa14.99□□□□□ -0.01
NCOR1-203ENST00000395849 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
NCOR1-203ENST00000395849 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
NCOR1-203ENST00000395849 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
NCOR1-203ENST00000395849 NACADO15069 1562 aa14.58□□□□□ -0.08
NCOR1-203ENST00000395849 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
NCOR1-203ENST00000395849 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
NCOR1-203ENST00000395849 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
NCOR1-203ENST00000395849 CECR2Q9BXF3 1484 aa14.43□□□□□ -0.1
NCOR1-203ENST00000395849 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
NCOR1-203ENST00000395849 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
NCOR1-203ENST00000395849 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
NCOR1-203ENST00000395849 WIZO95785 1651 aa14.21□□□□□ -0.13
NCOR1-203ENST00000395849 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
NCOR1-203ENST00000395849 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
NCOR1-203ENST00000395849 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
NCOR1-203ENST00000395849 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
NCOR1-203ENST00000395849 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
NCOR1-203ENST00000395849 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
NCOR1-203ENST00000395849 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.16
NCOR1-203ENST00000395849 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
NCOR1-203ENST00000395849 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
NCOR1-203ENST00000395849 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
NCOR1-203ENST00000395849 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
NCOR1-203ENST00000395849 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
NCOR1-203ENST00000395849 EIF4G1Q04637 1599 aaKnown RBP13.78□□□□□ -0.2
NCOR1-203ENST00000395849 PCGF6Q9BYE7 350 aa13.76□□□□□ -0.21
NCOR1-203ENST00000395849 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
NCOR1-203ENST00000395849 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
NCOR1-203ENST00000395849 SOGA1O94964 1423 aa13.63□□□□□ -0.23
NCOR1-203ENST00000395849 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
NCOR1-203ENST00000395849 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
NCOR1-203ENST00000395849 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
NCOR1-203ENST00000395849 NCAPD3P42695 1498 aa13.53□□□□□ -0.24
NCOR1-203ENST00000395849 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
NCOR1-203ENST00000395849 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
NCOR1-203ENST00000395849 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
NCOR1-203ENST00000395849 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
NCOR1-203ENST00000395849 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
NCOR1-203ENST00000395849 TTBK1Q5TCY1 1321 aaPredicted RBP13.45□□□□□ -0.26
NCOR1-203ENST00000395849 HRCP23327 699 aa13.43□□□□□ -0.26
NCOR1-203ENST00000395849 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
NCOR1-203ENST00000395849 RANGAP1P46060 587 aaPredicted RBP13.41□□□□□ -0.26
NCOR1-203ENST00000395849 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
NCOR1-203ENST00000395849 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
NCOR1-203ENST00000395849 CFTRP13569 1480 aa13.34□□□□□ -0.27
NCOR1-203ENST00000395849 EEA1Q15075 1411 aa13.32□□□□□ -0.28
NCOR1-203ENST00000395849 CUX1P39880 1505 aa13.32□□□□□ -0.28
NCOR1-203ENST00000395849 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
NCOR1-203ENST00000395849 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
NCOR1-203ENST00000395849 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
NCOR1-203ENST00000395849 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
NCOR1-203ENST00000395849 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
NCOR1-203ENST00000395849 NESP48681 1621 aa13.26□□□□□ -0.29
NCOR1-203ENST00000395849 BIVM-ERCC5R4GMW8 1640 aa13.25□□□□□ -0.29
NCOR1-203ENST00000395849 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
NCOR1-203ENST00000395849 KIF21BO75037 1637 aa13.18□□□□□ -0.3
NCOR1-203ENST00000395849 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
NCOR1-203ENST00000395849 CLIP1P30622 1438 aa13.17□□□□□ -0.3
NCOR1-203ENST00000395849 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
NCOR1-203ENST00000395849 CUX2O14529 1486 aa13.14□□□□□ -0.31
NCOR1-203ENST00000395849 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
NCOR1-203ENST00000395849 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
NCOR1-203ENST00000395849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
NCOR1-203ENST00000395849 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
NCOR1-203ENST00000395849 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
NCOR1-203ENST00000395849 IGF1RP08069 1367 aa13.09□□□□□ -0.31
NCOR1-203ENST00000395849 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
NCOR1-203ENST00000395849 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
NCOR1-203ENST00000395849 APLP2Q06481 763 aa13.02□□□□□ -0.32
NCOR1-203ENST00000395849 ERICH3Q5RHP9 1530 aa13.02□□□□□ -0.33
NCOR1-203ENST00000395849 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
NCOR1-203ENST00000395849 POLA1P09884 1462 aaPredicted RBP13.02□□□□□ -0.33
NCOR1-203ENST00000395849 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
NCOR1-203ENST00000395849 URB2Q14146 1524 aaKnown RBP13.01□□□□□ -0.33
NCOR1-203ENST00000395849 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
NCOR1-203ENST00000395849 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
NCOR1-203ENST00000395849 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
NCOR1-203ENST00000395849 DNMBPQ6XZF7 1577 aa12.99□□□□□ -0.33
NCOR1-203ENST00000395849 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
NCOR1-203ENST00000395849 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
NCOR1-203ENST00000395849 LAMC3Q9Y6N6 1575 aa12.97□□□□□ -0.33
NCOR1-203ENST00000395849 PDS5BQ9NTI5 1447 aa12.95□□□□□ -0.34
NCOR1-203ENST00000395849 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
NCOR1-203ENST00000395849 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
NCOR1-203ENST00000395849 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
NCOR1-203ENST00000395849 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
NCOR1-203ENST00000395849 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
NCOR1-203ENST00000395849 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
NCOR1-203ENST00000395849 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
NCOR1-203ENST00000395849 ITGAEP38570 1179 aa12.83□□□□□ -0.36
NCOR1-203ENST00000395849 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.368e-7■■■■□ 23.7
NCOR1-203ENST00000395849 FHOD3Q2V2M9 1422 aa12.82□□□□□ -0.36
NCOR1-203ENST00000395849 WDR97A6NE52 1622 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms