RNA–Protein interactions for RNA: ENST00000395774.1

RAI1-202, Transcript of retinoic acid induced 1, humanhuman

TSL 2

Gene RAI1, Length 2,928 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-202ENST00000395774 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
RAI1-202ENST00000395774 CCDC180Q9P1Z9 1646 aa28.63■■■□□ 2.17
RAI1-202ENST00000395774 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
RAI1-202ENST00000395774 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
RAI1-202ENST00000395774 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
RAI1-202ENST00000395774 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
RAI1-202ENST00000395774 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
RAI1-202ENST00000395774 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
RAI1-202ENST00000395774 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
RAI1-202ENST00000395774 ABCC9O60706 1549 aa26.72■■□□□ 1.87
RAI1-202ENST00000395774 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
RAI1-202ENST00000395774 NACADO15069 1562 aa26.4■■□□□ 1.82
RAI1-202ENST00000395774 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
RAI1-202ENST00000395774 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
RAI1-202ENST00000395774 HRCP23327 699 aa26.01■■□□□ 1.75
RAI1-202ENST00000395774 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
RAI1-202ENST00000395774 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
RAI1-202ENST00000395774 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
RAI1-202ENST00000395774 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
RAI1-202ENST00000395774 WIZO95785 1651 aa25.81■■□□□ 1.72
RAI1-202ENST00000395774 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
RAI1-202ENST00000395774 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
RAI1-202ENST00000395774 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
RAI1-202ENST00000395774 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
RAI1-202ENST00000395774 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
RAI1-202ENST00000395774 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
RAI1-202ENST00000395774 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
RAI1-202ENST00000395774 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
RAI1-202ENST00000395774 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
RAI1-202ENST00000395774 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
RAI1-202ENST00000395774 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
RAI1-202ENST00000395774 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
RAI1-202ENST00000395774 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
RAI1-202ENST00000395774 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
RAI1-202ENST00000395774 PEG3Q9GZU2 1588 aa25.09■■□□□ 1.61
RAI1-202ENST00000395774 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
RAI1-202ENST00000395774 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
RAI1-202ENST00000395774 EEA1Q15075 1411 aa24.92■■□□□ 1.58
RAI1-202ENST00000395774 SOGA1O94964 1423 aa24.86■■□□□ 1.57
RAI1-202ENST00000395774 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
RAI1-202ENST00000395774 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
RAI1-202ENST00000395774 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
RAI1-202ENST00000395774 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
RAI1-202ENST00000395774 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
RAI1-202ENST00000395774 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
RAI1-202ENST00000395774 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
RAI1-202ENST00000395774 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
RAI1-202ENST00000395774 GOLGA3Q08378 1498 aa24.68■■□□□ 1.54
RAI1-202ENST00000395774 KIF21BO75037 1637 aa24.6■■□□□ 1.53
RAI1-202ENST00000395774 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
RAI1-202ENST00000395774 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
RAI1-202ENST00000395774 TOP2BQ02880 1626 aa24.45■■□□□ 1.51
RAI1-202ENST00000395774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
RAI1-202ENST00000395774 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
RAI1-202ENST00000395774 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
RAI1-202ENST00000395774 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
RAI1-202ENST00000395774 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
RAI1-202ENST00000395774 CLIP1P30622 1438 aa24.33■■□□□ 1.49
RAI1-202ENST00000395774 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.49
RAI1-202ENST00000395774 RAPGEF2Q9Y4G8 1499 aa24.3■■□□□ 1.48
RAI1-202ENST00000395774 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
RAI1-202ENST00000395774 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
RAI1-202ENST00000395774 CUX1P39880 1505 aa24.17■■□□□ 1.46
RAI1-202ENST00000395774 PRXQ9BXM0 1461 aa24.15■■□□□ 1.46
RAI1-202ENST00000395774 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
RAI1-202ENST00000395774 CFTRP13569 1480 aa24.14■■□□□ 1.46
RAI1-202ENST00000395774 APLP2Q06481 763 aa24.04■■□□□ 1.44
RAI1-202ENST00000395774 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
RAI1-202ENST00000395774 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
RAI1-202ENST00000395774 HNRNPUL2Q1KMD3 747 aaKnown RBP23.93■■□□□ 1.42
RAI1-202ENST00000395774 DIEXFQ68CQ4 756 aaKnown RBP23.93■■□□□ 1.42
RAI1-202ENST00000395774 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
RAI1-202ENST00000395774 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
RAI1-202ENST00000395774 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
RAI1-202ENST00000395774 ZNF316A6NFI3 1004 aaPredicted RBP23.82■■□□□ 1.4
RAI1-202ENST00000395774 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
RAI1-202ENST00000395774 CUX2O14529 1486 aa23.78■■□□□ 1.4
RAI1-202ENST00000395774 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
RAI1-202ENST00000395774 IGF1RP08069 1367 aa23.73■■□□□ 1.39
RAI1-202ENST00000395774 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
RAI1-202ENST00000395774 ACIN1Q9UKV3 1341 aaKnown RBP23.72■■□□□ 1.39
RAI1-202ENST00000395774 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
RAI1-202ENST00000395774 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
RAI1-202ENST00000395774 CLSPNQ9HAW4 1339 aa23.67■■□□□ 1.38
RAI1-202ENST00000395774 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
RAI1-202ENST00000395774 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
RAI1-202ENST00000395774 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
RAI1-202ENST00000395774 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
RAI1-202ENST00000395774 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
RAI1-202ENST00000395774 DHX57Q6P158 1386 aaKnown RBP23.61■■□□□ 1.37
RAI1-202ENST00000395774 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
RAI1-202ENST00000395774 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
RAI1-202ENST00000395774 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
RAI1-202ENST00000395774 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
RAI1-202ENST00000395774 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
RAI1-202ENST00000395774 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
RAI1-202ENST00000395774 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
RAI1-202ENST00000395774 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
RAI1-202ENST00000395774 CUL7Q14999 1698 aa23.45■■□□□ 1.34
RAI1-202ENST00000395774 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms