RNA–Protein interactions for RNA: ENST00000395758.3

BICD1-202, Transcript of BICD cargo adaptor 1, humanhuman

TSL 1 (best)

Gene BICD1, Length 3,194 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BICD1-202ENST00000395758 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
BICD1-202ENST00000395758 HRCP23327 699 aa15.08■□□□□ 0
BICD1-202ENST00000395758 ABCC9O60706 1549 aa14.88□□□□□ -0.03
BICD1-202ENST00000395758 PPARGC1BQ86YN6 1023 aaKnown RBP14.86□□□□□ -0.03
BICD1-202ENST00000395758 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
BICD1-202ENST00000395758 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
BICD1-202ENST00000395758 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
BICD1-202ENST00000395758 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
BICD1-202ENST00000395758 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
BICD1-202ENST00000395758 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
BICD1-202ENST00000395758 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
BICD1-202ENST00000395758 CHIC1Q5VXU3 224 aa14.6□□□□□ -0.07
BICD1-202ENST00000395758 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
BICD1-202ENST00000395758 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
BICD1-202ENST00000395758 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
BICD1-202ENST00000395758 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
BICD1-202ENST00000395758 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
BICD1-202ENST00000395758 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
BICD1-202ENST00000395758 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
BICD1-202ENST00000395758 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
BICD1-202ENST00000395758 MYT1Q01538 1121 aa14.04□□□□□ -0.16
BICD1-202ENST00000395758 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
BICD1-202ENST00000395758 NACADO15069 1562 aa13.97□□□□□ -0.17
BICD1-202ENST00000395758 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
BICD1-202ENST00000395758 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
BICD1-202ENST00000395758 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
BICD1-202ENST00000395758 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
BICD1-202ENST00000395758 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
BICD1-202ENST00000395758 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
BICD1-202ENST00000395758 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.22
BICD1-202ENST00000395758 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
BICD1-202ENST00000395758 TTBK1Q5TCY1 1321 aaPredicted RBP13.67□□□□□ -0.22
BICD1-202ENST00000395758 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
BICD1-202ENST00000395758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
BICD1-202ENST00000395758 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
BICD1-202ENST00000395758 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
BICD1-202ENST00000395758 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
BICD1-202ENST00000395758 DIEXFQ68CQ4 756 aaKnown RBP13.57□□□□□ -0.24
BICD1-202ENST00000395758 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
BICD1-202ENST00000395758 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
BICD1-202ENST00000395758 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
BICD1-202ENST00000395758 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
BICD1-202ENST00000395758 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
BICD1-202ENST00000395758 CECR2Q9BXF3 1484 aa13.39□□□□□ -0.27
BICD1-202ENST00000395758 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
BICD1-202ENST00000395758 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
BICD1-202ENST00000395758 WIZO95785 1651 aa13.3□□□□□ -0.28
BICD1-202ENST00000395758 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
BICD1-202ENST00000395758 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
BICD1-202ENST00000395758 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
BICD1-202ENST00000395758 MIER1Q8N108 512 aa13.22□□□□□ -0.29
BICD1-202ENST00000395758 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
BICD1-202ENST00000395758 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
BICD1-202ENST00000395758 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
BICD1-202ENST00000395758 EEA1Q15075 1411 aa13.13□□□□□ -0.31
BICD1-202ENST00000395758 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
BICD1-202ENST00000395758 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
BICD1-202ENST00000395758 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
BICD1-202ENST00000395758 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
BICD1-202ENST00000395758 SOGA1O94964 1423 aa13.06□□□□□ -0.32
BICD1-202ENST00000395758 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
BICD1-202ENST00000395758 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
BICD1-202ENST00000395758 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
BICD1-202ENST00000395758 KIF21BO75037 1637 aa13.04□□□□□ -0.32
BICD1-202ENST00000395758 BCL11AQ9H165 835 aa13.04□□□□□ -0.32
BICD1-202ENST00000395758 RUSC2Q8N2Y8 1516 aa12.99□□□□□ -0.33
BICD1-202ENST00000395758 BCANQ96GW7 911 aa12.99□□□□□ -0.33
BICD1-202ENST00000395758 RANGAP1P46060 587 aaPredicted RBP12.97□□□□□ -0.33
BICD1-202ENST00000395758 SMARCA4P51532 1647 aa12.96□□□□□ -0.33
BICD1-202ENST00000395758 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
BICD1-202ENST00000395758 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
BICD1-202ENST00000395758 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
BICD1-202ENST00000395758 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
BICD1-202ENST00000395758 CLIP1P30622 1438 aa12.91□□□□□ -0.34
BICD1-202ENST00000395758 DHX57Q6P158 1386 aaKnown RBP12.9□□□□□ -0.34
BICD1-202ENST00000395758 NCAPD3P42695 1498 aa12.9□□□□□ -0.35
BICD1-202ENST00000395758 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
BICD1-202ENST00000395758 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
BICD1-202ENST00000395758 CUX2O14529 1486 aa12.86□□□□□ -0.35
BICD1-202ENST00000395758 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
BICD1-202ENST00000395758 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
BICD1-202ENST00000395758 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
BICD1-202ENST00000395758 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
BICD1-202ENST00000395758 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
BICD1-202ENST00000395758 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.37
BICD1-202ENST00000395758 ITGAEP38570 1179 aa12.75□□□□□ -0.37
BICD1-202ENST00000395758 NESP48681 1621 aa12.75□□□□□ -0.37
BICD1-202ENST00000395758 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
BICD1-202ENST00000395758 PEG3Q9GZU2 1588 aa12.75□□□□□ -0.37
BICD1-202ENST00000395758 ARAP1Q96P48 1450 aa12.72□□□□□ -0.37
BICD1-202ENST00000395758 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
BICD1-202ENST00000395758 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.37
BICD1-202ENST00000395758 RBM19Q9Y4C8 960 aaKnown RBP12.7□□□□□ -0.38
BICD1-202ENST00000395758 FKBP8Q14318 412 aa12.69□□□□□ -0.38
BICD1-202ENST00000395758 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
BICD1-202ENST00000395758 TOP2BQ02880 1626 aa12.65□□□□□ -0.38
BICD1-202ENST00000395758 MSH5O43196 834 aa12.64□□□□□ -0.39
BICD1-202ENST00000395758 APLP2Q06481 763 aa12.63□□□□□ -0.39
BICD1-202ENST00000395758 HIRIP3Q9BW71 556 aaPredicted RBP12.62□□□□□ -0.39
BICD1-202ENST00000395758 LAMC3Q9Y6N6 1575 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms