RNA–Protein interactions for RNA: ENST00000395587.5

EIF3C-202, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3C, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-202ENST00000395587 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
EIF3C-202ENST00000395587 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
EIF3C-202ENST00000395587 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
EIF3C-202ENST00000395587 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
EIF3C-202ENST00000395587 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
EIF3C-202ENST00000395587 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
EIF3C-202ENST00000395587 ABCC9O60706 1549 aa19.12■□□□□ 0.65
EIF3C-202ENST00000395587 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
EIF3C-202ENST00000395587 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
EIF3C-202ENST00000395587 NACADO15069 1562 aa18.84■□□□□ 0.61
EIF3C-202ENST00000395587 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
EIF3C-202ENST00000395587 UNC13AQ9UPW8 1703 aa18.59■□□□□ 0.57
EIF3C-202ENST00000395587 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
EIF3C-202ENST00000395587 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
EIF3C-202ENST00000395587 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
EIF3C-202ENST00000395587 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
EIF3C-202ENST00000395587 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
EIF3C-202ENST00000395587 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
EIF3C-202ENST00000395587 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
EIF3C-202ENST00000395587 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
EIF3C-202ENST00000395587 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
EIF3C-202ENST00000395587 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
EIF3C-202ENST00000395587 SMARCA4P51532 1647 aa17.81■□□□□ 0.44
EIF3C-202ENST00000395587 WIZO95785 1651 aa17.8■□□□□ 0.44
EIF3C-202ENST00000395587 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
EIF3C-202ENST00000395587 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
EIF3C-202ENST00000395587 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
EIF3C-202ENST00000395587 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
EIF3C-202ENST00000395587 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.41
EIF3C-202ENST00000395587 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
EIF3C-202ENST00000395587 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
EIF3C-202ENST00000395587 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.39
EIF3C-202ENST00000395587 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
EIF3C-202ENST00000395587 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
EIF3C-202ENST00000395587 HRCP23327 699 aa17.42■□□□□ 0.38
EIF3C-202ENST00000395587 HMGXB3Q12766 1538 aa17.39■□□□□ 0.37
EIF3C-202ENST00000395587 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
EIF3C-202ENST00000395587 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
EIF3C-202ENST00000395587 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
EIF3C-202ENST00000395587 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
EIF3C-202ENST00000395587 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
EIF3C-202ENST00000395587 SOGA1O94964 1423 aa17.18■□□□□ 0.34
EIF3C-202ENST00000395587 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
EIF3C-202ENST00000395587 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
EIF3C-202ENST00000395587 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
EIF3C-202ENST00000395587 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
EIF3C-202ENST00000395587 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
EIF3C-202ENST00000395587 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
EIF3C-202ENST00000395587 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
EIF3C-202ENST00000395587 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
EIF3C-202ENST00000395587 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
EIF3C-202ENST00000395587 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
EIF3C-202ENST00000395587 EEA1Q15075 1411 aa16.93■□□□□ 0.3
EIF3C-202ENST00000395587 CFTRP13569 1480 aa16.92■□□□□ 0.3
EIF3C-202ENST00000395587 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
EIF3C-202ENST00000395587 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
EIF3C-202ENST00000395587 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
EIF3C-202ENST00000395587 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
EIF3C-202ENST00000395587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
EIF3C-202ENST00000395587 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
EIF3C-202ENST00000395587 NESP48681 1621 aa16.8■□□□□ 0.28
EIF3C-202ENST00000395587 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
EIF3C-202ENST00000395587 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
EIF3C-202ENST00000395587 CCER1Q8TC90 406 aaPredicted RBP16.75■□□□□ 0.27
EIF3C-202ENST00000395587 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
EIF3C-202ENST00000395587 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
EIF3C-202ENST00000395587 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
EIF3C-202ENST00000395587 CLIP1P30622 1438 aa16.72■□□□□ 0.27
EIF3C-202ENST00000395587 CUX1P39880 1505 aa16.68■□□□□ 0.26
EIF3C-202ENST00000395587 APLP2Q06481 763 aa16.68■□□□□ 0.26
EIF3C-202ENST00000395587 KIF21BO75037 1637 aa16.67■□□□□ 0.26
EIF3C-202ENST00000395587 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
EIF3C-202ENST00000395587 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
EIF3C-202ENST00000395587 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
EIF3C-202ENST00000395587 DNMBPQ6XZF7 1577 aa16.57■□□□□ 0.24
EIF3C-202ENST00000395587 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
EIF3C-202ENST00000395587 VPS8Q8N3P4 1428 aa16.56■□□□□ 0.24
EIF3C-202ENST00000395587 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
EIF3C-202ENST00000395587 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
EIF3C-202ENST00000395587 CUX2O14529 1486 aa16.52■□□□□ 0.24
EIF3C-202ENST00000395587 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
EIF3C-202ENST00000395587 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
EIF3C-202ENST00000395587 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
EIF3C-202ENST00000395587 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
EIF3C-202ENST00000395587 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
EIF3C-202ENST00000395587 WDR62O43379 1518 aa16.45■□□□□ 0.22
EIF3C-202ENST00000395587 MRC2Q9UBG0 1479 aa16.44■□□□□ 0.22
EIF3C-202ENST00000395587 IGF1RP08069 1367 aa16.44■□□□□ 0.22
EIF3C-202ENST00000395587 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
EIF3C-202ENST00000395587 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
EIF3C-202ENST00000395587 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
EIF3C-202ENST00000395587 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
EIF3C-202ENST00000395587 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
EIF3C-202ENST00000395587 TARBP1Q13395 1621 aaKnown RBP16.39■□□□□ 0.21
EIF3C-202ENST00000395587 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
EIF3C-202ENST00000395587 ATP1B4Q9UN42 357 aaPredicted RBP16.37■□□□□ 0.21
EIF3C-202ENST00000395587 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
EIF3C-202ENST00000395587 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.21
EIF3C-202ENST00000395587 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
EIF3C-202ENST00000395587 ITGAEP38570 1179 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms