RNA–Protein interactions for RNA: ENST00000395346.6

PIGS-203, Transcript of phosphatidylinositol glycan anchor biosynthesis class S, humanhuman

TSL 1 (best) BASIC

Gene PIGS, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIGS-203ENST00000395346 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
PIGS-203ENST00000395346 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
PIGS-203ENST00000395346 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.72
PIGS-203ENST00000395346 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
PIGS-203ENST00000395346 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
PIGS-203ENST00000395346 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
PIGS-203ENST00000395346 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
PIGS-203ENST00000395346 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
PIGS-203ENST00000395346 MYO15BQ96JP2 1530 aa24.84■■□□□ 1.57
PIGS-203ENST00000395346 HRCP23327 699 aa24.78■■□□□ 1.56
PIGS-203ENST00000395346 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
PIGS-203ENST00000395346 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
PIGS-203ENST00000395346 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
PIGS-203ENST00000395346 ABCC9O60706 1549 aa24.33■■□□□ 1.49
PIGS-203ENST00000395346 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
PIGS-203ENST00000395346 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
PIGS-203ENST00000395346 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
PIGS-203ENST00000395346 NACADO15069 1562 aa23.91■■□□□ 1.42
PIGS-203ENST00000395346 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
PIGS-203ENST00000395346 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
PIGS-203ENST00000395346 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
PIGS-203ENST00000395346 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
PIGS-203ENST00000395346 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
PIGS-203ENST00000395346 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
PIGS-203ENST00000395346 WIZO95785 1651 aa23.64■■□□□ 1.37
PIGS-203ENST00000395346 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
PIGS-203ENST00000395346 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
PIGS-203ENST00000395346 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
PIGS-203ENST00000395346 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
PIGS-203ENST00000395346 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
PIGS-203ENST00000395346 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
PIGS-203ENST00000395346 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
PIGS-203ENST00000395346 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
PIGS-203ENST00000395346 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
PIGS-203ENST00000395346 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
PIGS-203ENST00000395346 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.29
PIGS-203ENST00000395346 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
PIGS-203ENST00000395346 SOGA1O94964 1423 aa22.94■■□□□ 1.26
PIGS-203ENST00000395346 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
PIGS-203ENST00000395346 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
PIGS-203ENST00000395346 NEUROD1Q13562 356 aa22.89■■□□□ 1.26
PIGS-203ENST00000395346 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
PIGS-203ENST00000395346 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
PIGS-203ENST00000395346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.83■■□□□ 1.24
PIGS-203ENST00000395346 CEP162Q5TB80 1403 aa22.81■■□□□ 1.24
PIGS-203ENST00000395346 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
PIGS-203ENST00000395346 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
PIGS-203ENST00000395346 GTF3C3Q9Y5Q9 886 aa22.74■■□□□ 1.23
PIGS-203ENST00000395346 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
PIGS-203ENST00000395346 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
PIGS-203ENST00000395346 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
PIGS-203ENST00000395346 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
PIGS-203ENST00000395346 EEA1Q15075 1411 aa22.69■■□□□ 1.22
PIGS-203ENST00000395346 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
PIGS-203ENST00000395346 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
PIGS-203ENST00000395346 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
PIGS-203ENST00000395346 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
PIGS-203ENST00000395346 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
PIGS-203ENST00000395346 CENPBP07199 599 aaPredicted RBP22.5■■□□□ 1.19
PIGS-203ENST00000395346 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
PIGS-203ENST00000395346 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
PIGS-203ENST00000395346 MYT1Q01538 1121 aa22.4■■□□□ 1.18
PIGS-203ENST00000395346 KIF21BO75037 1637 aa22.4■■□□□ 1.18
PIGS-203ENST00000395346 CLIP1P30622 1438 aa22.39■■□□□ 1.17
PIGS-203ENST00000395346 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
PIGS-203ENST00000395346 RAPGEF2Q9Y4G8 1499 aa22.36■■□□□ 1.17
PIGS-203ENST00000395346 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
PIGS-203ENST00000395346 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
PIGS-203ENST00000395346 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
PIGS-203ENST00000395346 APLP2Q06481 763 aa22.24■■□□□ 1.15
PIGS-203ENST00000395346 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
PIGS-203ENST00000395346 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
PIGS-203ENST00000395346 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
PIGS-203ENST00000395346 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
PIGS-203ENST00000395346 CUX1P39880 1505 aa22.1■■□□□ 1.13
PIGS-203ENST00000395346 PRXQ9BXM0 1461 aa22.07■■□□□ 1.12
PIGS-203ENST00000395346 MIER1Q8N108 512 aa22.06■■□□□ 1.12
PIGS-203ENST00000395346 ERICH3Q5RHP9 1530 aa22.03■■□□□ 1.12
PIGS-203ENST00000395346 ARAP1Q96P48 1450 aa22■■□□□ 1.11
PIGS-203ENST00000395346 CFTRP13569 1480 aa22■■□□□ 1.11
PIGS-203ENST00000395346 KIF27Q86VH2 1401 aa22■■□□□ 1.11
PIGS-203ENST00000395346 KANK4Q5T7N3 995 aaPredicted RBP21.97■■□□□ 1.11
PIGS-203ENST00000395346 CUX2O14529 1486 aa21.83■■□□□ 1.08
PIGS-203ENST00000395346 ARHGAP35Q9NRY4 1499 aa21.82■■□□□ 1.08
PIGS-203ENST00000395346 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
PIGS-203ENST00000395346 IGF1RP08069 1367 aa21.77■■□□□ 1.08
PIGS-203ENST00000395346 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.07
PIGS-203ENST00000395346 ITGAEP38570 1179 aa21.76■■□□□ 1.07
PIGS-203ENST00000395346 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
PIGS-203ENST00000395346 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
PIGS-203ENST00000395346 RRBP1Q9P2E9 1410 aaKnown RBP21.71■■□□□ 1.07
PIGS-203ENST00000395346 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
PIGS-203ENST00000395346 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
PIGS-203ENST00000395346 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
PIGS-203ENST00000395346 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
PIGS-203ENST00000395346 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
PIGS-203ENST00000395346 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
PIGS-203ENST00000395346 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
PIGS-203ENST00000395346 ATP1B4Q9UN42 357 aaPredicted RBP21.58■■□□□ 1.04
PIGS-203ENST00000395346 TIAM1Q13009 1591 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms