RNA–Protein interactions for RNA: ENST00000394725.2

SIAH1-203, Transcript of siah E3 ubiquitin protein ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIAH1, Length 2,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH1-203ENST00000394725 SF3B1O75533 1304 aaKnown RBP eCLIP29.01■■■□□ 2.239e-6■■■■■ 68.9
SIAH1-203ENST00000394725 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.02■■□□□ 1.922e-15■■■■■ 66.6
SIAH1-203ENST00000394725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.55■■■□□ 2.482e-6■■■■■ 39.1
SIAH1-203ENST00000394725 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.72■■■□□ 2.191e-7■■■■■ 38.2
SIAH1-203ENST00000394725 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.89■■■□□ 2.051e-9■■■■■ 31.4
SIAH1-203ENST00000394725 TARDBPQ13148 414 aaKnown RBP eCLIP26.38■■□□□ 1.813e-16■■■■■ 28.4
SIAH1-203ENST00000394725 CSTF2P33240 577 aaKnown RBP eCLIP26.13■■□□□ 1.774e-10■■■■■ 28
SIAH1-203ENST00000394725 HNRNPMP52272 730 aaKnown RBP eCLIP40.16■■■■■ 4.022e-7■■■■■ 27
SIAH1-203ENST00000394725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.39■■□□□ 1.496e-6■■■■□ 22.2
SIAH1-203ENST00000394725 RBM15Q96T37 977 aaKnown RBP eCLIP29.47■■■□□ 2.312e-7■■■■□ 20.4
SIAH1-203ENST00000394725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.24■■□□□ 1.638e-6■■■■□ 20.1
SIAH1-203ENST00000394725 NONOQ15233 471 aaKnown RBP eCLIP31.91■■■□□ 2.71e-6■■■■□ 19.4
SIAH1-203ENST00000394725 NKRFO15226 690 aaKnown RBP eCLIP31.36■■■□□ 2.611e-8■■■□□ 18.9
SIAH1-203ENST00000394725 HNRNPCP07910 306 aaKnown RBP eCLIP25.71■■□□□ 1.716e-6■■■□□ 18.7
SIAH1-203ENST00000394725 QKIQ96PU8 341 aaKnown RBP eCLIP29.15■■■□□ 2.261e-10■■■□□ 18.3
SIAH1-203ENST00000394725 DDX3XO00571 662 aaKnown RBP eCLIP30.6■■■□□ 2.491e-8■■■□□ 18.3
SIAH1-203ENST00000394725 FUBP3Q96I24 572 aaKnown RBP eCLIP28.78■■■□□ 2.24e-6■■■□□ 17.2
SIAH1-203ENST00000394725 HNRNPLP14866 589 aaKnown RBP eCLIP28.17■■■□□ 2.11e-8■■■□□ 16.5
SIAH1-203ENST00000394725 KHSRPQ92945 711 aaKnown RBP eCLIP29.48■■■□□ 2.312e-9■■■□□ 15.7
SIAH1-203ENST00000394725 SFPQP23246 707 aaKnown RBP eCLIP31.83■■■□□ 2.692e-6■■■□□ 15.5
SIAH1-203ENST00000394725 NCBP2P52298 156 aaKnown RBP eCLIP26.65■■□□□ 1.865e-8■■■□□ 15.2
SIAH1-203ENST00000394725 DDX6P26196 483 aaKnown RBP eCLIP27.8■■■□□ 2.044e-6■■□□□ 13.6
SIAH1-203ENST00000394725 MATR3P43243 847 aaKnown RBP eCLIP30.52■■■□□ 2.483e-6■■□□□ 12.5
SIAH1-203ENST00000394725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.06■■■■■ 42e-6■■□□□ 12.3
SIAH1-203ENST00000394725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.89■■■■□ 3.59e-9■■□□□ 11.8
SIAH1-203ENST00000394725 AATFQ9NY61 560 aaKnown RBP eCLIP32.77■■■□□ 2.849e-6■□□□□ 9.6
SIAH1-203ENST00000394725 FTOQ9C0B1 505 aaKnown RBP eCLIP32.95■■■□□ 2.877e-8■□□□□ 9.4
Retrieved 27 of 27 RNA–protein pairs in 6.5 ms