RNA–Protein interactions for RNA: ENST00000393526.6

FAM178B-201, Transcript of family with sequence similarity 178 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM178B, Length 1,004 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM178B-201ENST00000393526 GTF2F1P35269 517 aaKnown RBP eCLIP14.14□□□□□ -0.159e-8■■■■■ 161.6
FAM178B-201ENST00000393526 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.45□□□□□ -0.268e-39■■■■■ 82.2
FAM178B-201ENST00000393526 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.04□□□□□ -0.485e-8■■■■■ 76.6
FAM178B-201ENST00000393526 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.13e-8■■■■■ 75.3
FAM178B-201ENST00000393526 FTOQ9C0B1 505 aaKnown RBP eCLIP14.55□□□□□ -0.084e-8■■■■■ 73.4
FAM178B-201ENST00000393526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.86□□□□□ -0.199e-7■■■■■ 67.5
FAM178B-201ENST00000393526 EWSR1Q01844 656 aaKnown RBP eCLIP9.55□□□□□ -0.881e-8■■■■■ 65.9
FAM178B-201ENST00000393526 DDX21Q9NR30 783 aaKnown RBP eCLIP16.79■□□□□ 0.289e-8■■■■■ 58.5
FAM178B-201ENST00000393526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.82□□□□□ -0.22e-12■■■■■ 57.6
FAM178B-201ENST00000393526 EIF4G2P78344 907 aaKnown RBP eCLIP18.14■□□□□ 0.495e-8■■■■■ 50.4
FAM178B-201ENST00000393526 TARDBPQ13148 414 aaKnown RBP eCLIP12.75□□□□□ -0.378e-8■■■■■ 43.9
FAM178B-201ENST00000393526 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.446e-7■■■■■ 40.6
FAM178B-201ENST00000393526 RBFOX2O43251 390 aaKnown RBP eCLIP10.09□□□□□ -0.791e-11■■■■■ 39.2
FAM178B-201ENST00000393526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■■■ 36.4
FAM178B-201ENST00000393526 SF3B1O75533 1304 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■■■ 34.1
FAM178B-201ENST00000393526 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.021e-11■■■■■ 30.2
FAM178B-201ENST00000393526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.03□□□□□ -0.166e-7■■■■■ 28.3
FAM178B-201ENST00000393526 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.214e-9■■■■□ 24.8
FAM178B-201ENST00000393526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.85□□□□□ -0.672e-15■■■■□ 23.2
FAM178B-201ENST00000393526 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.052e-7■■■■□ 22.3
FAM178B-201ENST00000393526 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.841e-7■■■■□ 22.3
FAM178B-201ENST00000393526 NIPBLQ6KC79 2804 aaeCLIP10.85□□□□□ -0.671e-5■■■■□ 22.3
FAM178B-201ENST00000393526 SND1Q7KZF4 910 aaKnown RBP eCLIP13.39□□□□□ -0.277e-14■■■■□ 20.8
FAM178B-201ENST00000393526 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.113e-8■■■■□ 19.6
FAM178B-201ENST00000393526 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.92□□□□□ -0.664e-8■■■■□ 19.4
FAM178B-201ENST00000393526 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.253e-6■■■■□ 19.3
FAM178B-201ENST00000393526 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.221e-6■■■□□ 18.8
FAM178B-201ENST00000393526 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■□□ 18.6
FAM178B-201ENST00000393526 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.763e-7■■■□□ 18.5
FAM178B-201ENST00000393526 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.146e-7■■■□□ 18.2
FAM178B-201ENST00000393526 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■□□ 18
FAM178B-201ENST00000393526 AARSP49588 968 aaKnown RBP eCLIP14.02□□□□□ -0.172e-6■■■□□ 17.3
FAM178B-201ENST00000393526 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.342e-8■■■□□ 17.3
FAM178B-201ENST00000393526 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.916e-12■■■□□ 17.1
FAM178B-201ENST00000393526 FUSP35637 526 aaKnown RBP eCLIP8.62□□□□□ -1.032e-7■■■□□ 16.9
FAM178B-201ENST00000393526 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.073e-9■■■□□ 16.7
FAM178B-201ENST00000393526 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.393e-23■■■□□ 16.2
FAM178B-201ENST00000393526 DDX6P26196 483 aaKnown RBP eCLIP13.7□□□□□ -0.221e-7■■■□□ 16.1
FAM178B-201ENST00000393526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.88■□□□□ 0.774e-7■■■□□ 15.8
FAM178B-201ENST00000393526 PABPC4Q13310 644 aaKnown RBP eCLIP15.39■□□□□ 0.051e-8■■■□□ 15.8
FAM178B-201ENST00000393526 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.234e-10■■■□□ 15.7
FAM178B-201ENST00000393526 TRA2AQ13595 282 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■■■□□ 15.6
FAM178B-201ENST00000393526 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.84□□□□□ -0.354e-7■■■□□ 15.4
FAM178B-201ENST00000393526 TAF15Q92804 592 aaKnown RBP eCLIP10.52□□□□□ -0.732e-7■■■□□ 15.3
FAM178B-201ENST00000393526 PCBP1Q15365 356 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■■■□□ 15.3
FAM178B-201ENST00000393526 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.251e-24■■■□□ 15.2
FAM178B-201ENST00000393526 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.576e-8■■■□□ 15.2
FAM178B-201ENST00000393526 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.263e-12■■■□□ 15.2
FAM178B-201ENST00000393526 NCBP2P52298 156 aaKnown RBP eCLIP11.95□□□□□ -0.53e-10■■■□□ 15
FAM178B-201ENST00000393526 NSUN2Q08J23 767 aaKnown RBP eCLIP13.09□□□□□ -0.313e-7■■■□□ 14.9
FAM178B-201ENST00000393526 ILF3Q12906 894 aaKnown RBP eCLIP12.82□□□□□ -0.368e-7■■□□□ 14.4
FAM178B-201ENST00000393526 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.156e-7■■□□□ 14.4
FAM178B-201ENST00000393526 SMNDC1O75940 238 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■□□□ 14.4
FAM178B-201ENST00000393526 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.43□□□□□ -0.268e-8■■□□□ 14.1
FAM178B-201ENST00000393526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■■□□□ 14.1
FAM178B-201ENST00000393526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■□□□ 14.1
FAM178B-201ENST00000393526 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.012e-8■■□□□ 13.8
FAM178B-201ENST00000393526 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.373e-6■■□□□ 13.7
FAM178B-201ENST00000393526 CPSF6Q16630 551 aaKnown RBP eCLIP12.21□□□□□ -0.453e-7■■□□□ 13.7
FAM178B-201ENST00000393526 LSM11P83369 360 aaKnown RBP eCLIP11.41□□□□□ -0.589e-7■■□□□ 13.3
FAM178B-201ENST00000393526 SF3B4Q15427 424 aaKnown RBP eCLIP11.66□□□□□ -0.541e-7■■□□□ 13.2
FAM178B-201ENST00000393526 RBM22Q9NW64 420 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■■□□□ 13
FAM178B-201ENST00000393526 LARP4Q71RC2 724 aaKnown RBP eCLIP11.92□□□□□ -0.53e-8■■□□□ 12.8
FAM178B-201ENST00000393526 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.268e-33■■□□□ 12.8
FAM178B-201ENST00000393526 ZC3H11AO75152 810 aaKnown RBP eCLIP14.21□□□□□ -0.134e-7■■□□□ 12.7
FAM178B-201ENST00000393526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■□□□ 12.6
FAM178B-201ENST00000393526 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.327e-7■■□□□ 12.4
FAM178B-201ENST00000393526 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■□□□ 12.2
FAM178B-201ENST00000393526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.13■□□□□ 0.012e-7■■□□□ 12.2
FAM178B-201ENST00000393526 XRCC6P12956 609 aaKnown RBP eCLIP14.43□□□□□ -0.13e-11■■□□□ 11.8
FAM178B-201ENST00000393526 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■□□□ 11.8
FAM178B-201ENST00000393526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.79□□□□□ -0.21e-6■■□□□ 11.7
FAM178B-201ENST00000393526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.71■□□□□ 0.115e-39■■□□□ 11.5
FAM178B-201ENST00000393526 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■□□□ 11.4
FAM178B-201ENST00000393526 RBM15Q96T37 977 aaKnown RBP eCLIP12.99□□□□□ -0.333e-12■□□□□ 10.9
FAM178B-201ENST00000393526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.742e-12■□□□□ 10.8
FAM178B-201ENST00000393526 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12□□□□□ -0.497e-7■□□□□ 10.8
FAM178B-201ENST00000393526 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■□□□□ 10.7
FAM178B-201ENST00000393526 SRSF1Q07955 248 aaKnown RBP eCLIP11.92□□□□□ -0.52e-13■□□□□ 10.6
FAM178B-201ENST00000393526 PTBP1P26599 531 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■□□□□ 10.2
FAM178B-201ENST00000393526 U2AF2P26368 475 aaKnown RBP eCLIP14.6□□□□□ -0.073e-6■□□□□ 10.1
FAM178B-201ENST00000393526 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.324e-25■□□□□ 10.1
FAM178B-201ENST00000393526 PUS1Q9Y606 427 aaKnown RBP eCLIP9.74□□□□□ -0.856e-7■□□□□ 9.9
FAM178B-201ENST00000393526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.351e-12■□□□□ 9.7
FAM178B-201ENST00000393526 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.49□□□□□ -0.416e-13■□□□□ 9.4
FAM178B-201ENST00000393526 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.013e-10■□□□□ 9.1
FAM178B-201ENST00000393526 TIA1P31483 386 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■□□□□ 9.1
FAM178B-201ENST00000393526 AGGF1Q8N302 714 aaeCLIP12.71□□□□□ -0.375e-12■□□□□ 9.1
FAM178B-201ENST00000393526 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.271e-26■□□□□ 9.1
FAM178B-201ENST00000393526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.8■□□□□ 0.121e-15■□□□□ 8.7
FAM178B-201ENST00000393526 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.82□□□□□ -0.529e-7■□□□□ 8.2
FAM178B-201ENST00000393526 NOLC1Q14978 699 aaKnown RBP eCLIP14.18□□□□□ -0.142e-16■□□□□ 8.1
Retrieved 92 of 92 RNA–protein pairs in 18.2 ms