RNA–Protein interactions for RNA: ENST00000393451.7

ST7-208, Transcript of suppression of tumorigenicity 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ST7, Length 2,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ST7-208ENST00000393451 SF3B1O75533 1304 aaKnown RBP eCLIP28.65■■■□□ 2.182e-6■■■■■ 98.3
ST7-208ENST00000393451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.58■■■□□ 2.331e-7■■■■■ 91.1
ST7-208ENST00000393451 PUM2Q8TB72 1066 aaKnown RBP eCLIP26.71■■□□□ 1.876e-8■■■■■ 75.4
ST7-208ENST00000393451 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.96■■■□□ 2.073e-8■■■■■ 70.6
ST7-208ENST00000393451 WRNQ14191 1432 aaPredicted RBP eCLIP43.07■■■■■ 4.489e-6■■■■■ 50.1
ST7-208ENST00000393451 HNRNPMP52272 730 aaKnown RBP eCLIP37.15■■■■□ 3.544e-23■■■■■ 46.6
ST7-208ENST00000393451 RBFOX2O43251 390 aaKnown RBP eCLIP23.16■■□□□ 1.32e-12■■■■■ 43.7
ST7-208ENST00000393451 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.68■■□□□ 1.549e-7■■■■■ 38.3
ST7-208ENST00000393451 U2AF2P26368 475 aaKnown RBP eCLIP32.6■■■□□ 2.815e-16■■■■■ 37.4
ST7-208ENST00000393451 PCBP2Q15366 365 aaKnown RBP eCLIP27.47■■□□□ 1.991e-6■■■■■ 37.2
ST7-208ENST00000393451 QKIQ96PU8 341 aaKnown RBP eCLIP28.73■■■□□ 2.191e-6■■■■■ 34.1
ST7-208ENST00000393451 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP30.76■■■□□ 2.512e-8■■■■■ 33
ST7-208ENST00000393451 DDX3XO00571 662 aaKnown RBP eCLIP30.33■■■□□ 2.454e-14■■■■■ 32.7
ST7-208ENST00000393451 EIF4G2P78344 907 aaKnown RBP eCLIP38.68■■■■□ 3.781e-6■■■■■ 31
ST7-208ENST00000393451 PTBP1P26599 531 aaKnown RBP eCLIP26.4■■□□□ 1.823e-7■■■■■ 30.5
ST7-208ENST00000393451 MATR3P43243 847 aaKnown RBP eCLIP30.76■■■□□ 2.526e-7■■■■■ 28.2
ST7-208ENST00000393451 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.12■□□□□ 0.818e-14■■■■■ 27.8
ST7-208ENST00000393451 RBM15Q96T37 977 aaKnown RBP eCLIP29.56■■■□□ 2.324e-6■■■■■ 27.5
ST7-208ENST00000393451 NONOQ15233 471 aaKnown RBP eCLIP30.97■■■□□ 2.556e-8■■■■■ 27.1
ST7-208ENST00000393451 TARDBPQ13148 414 aaKnown RBP eCLIP26.41■■□□□ 1.822e-6■■■■□ 26
ST7-208ENST00000393451 HNRNPLP14866 589 aaKnown RBP eCLIP28.05■■■□□ 2.089e-8■■■■□ 25.4
ST7-208ENST00000393451 ILF3Q12906 894 aaKnown RBP eCLIP25.67■■□□□ 1.76e-7■■■■□ 24.1
ST7-208ENST00000393451 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP32.19■■■□□ 2.745e-6■■■■□ 23.6
ST7-208ENST00000393451 SND1Q7KZF4 910 aaKnown RBP eCLIP30.91■■■□□ 2.541e-10■■■■□ 21.3
ST7-208ENST00000393451 CPSF6Q16630 551 aaKnown RBP eCLIP27.05■■□□□ 1.927e-8■■■■□ 20.1
ST7-208ENST00000393451 KHDRBS1Q07666 443 aaKnown RBP eCLIP26.83■■□□□ 1.895e-6■■■□□ 18.6
ST7-208ENST00000393451 HNRNPCP07910 306 aaKnown RBP eCLIP27.79■■■□□ 2.045e-8■■■□□ 16.9
ST7-208ENST00000393451 PABPC4Q13310 644 aaKnown RBP eCLIP30.27■■■□□ 2.443e-6■■■□□ 15.2
ST7-208ENST00000393451 KHSRPQ92945 711 aaKnown RBP eCLIP28.69■■■□□ 2.182e-6■■□□□ 14
ST7-208ENST00000393451 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.14■■■□□ 2.743e-7■■□□□ 13.5
ST7-208ENST00000393451 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.3■■□□□ 1.966e-7■■□□□ 12.6
ST7-208ENST00000393451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.59■■■■□ 3.131e-6■■□□□ 11.7
ST7-208ENST00000393451 NKRFO15226 690 aaKnown RBP eCLIP30.85■■■□□ 2.538e-7■□□□□ 10.4
ST7-208ENST00000393451 U2AF1Q01081 240 aaKnown RBP eCLIP35.38■■■■□ 3.251e-8■□□□□ 10.2
ST7-208ENST00000393451 PPIGQ13427 754 aaKnown RBP eCLIP26.87■■□□□ 1.892e-6■□□□□ 8.5
Retrieved 35 of 35 RNA–protein pairs in 7.9 ms