RNA–Protein interactions for RNA: ENST00000393335.7

CENPN-203, Transcript of centromere protein N, humanhuman

TSL 2 BASIC

Gene CENPN, Length 1,556 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-203ENST00000393335 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
CENPN-203ENST00000393335 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
CENPN-203ENST00000393335 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
CENPN-203ENST00000393335 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
CENPN-203ENST00000393335 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
CENPN-203ENST00000393335 FOXD1Q16676 465 aa16.79■□□□□ 0.28
CENPN-203ENST00000393335 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
CENPN-203ENST00000393335 MSH5O43196 834 aa15.76■□□□□ 0.11
CENPN-203ENST00000393335 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
CENPN-203ENST00000393335 ABCC9O60706 1549 aa15.48■□□□□ 0.07
CENPN-203ENST00000393335 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
CENPN-203ENST00000393335 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
CENPN-203ENST00000393335 ADRA2BP18089 450 aa15.39■□□□□ 0.05
CENPN-203ENST00000393335 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
CENPN-203ENST00000393335 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
CENPN-203ENST00000393335 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
CENPN-203ENST00000393335 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
CENPN-203ENST00000393335 NACADO15069 1562 aa14.48□□□□□ -0.09
CENPN-203ENST00000393335 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
CENPN-203ENST00000393335 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
CENPN-203ENST00000393335 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
CENPN-203ENST00000393335 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
CENPN-203ENST00000393335 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
CENPN-203ENST00000393335 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
CENPN-203ENST00000393335 ZCCHC6Q5VYS8 1495 aaKnown RBP14.08□□□□□ -0.16
CENPN-203ENST00000393335 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.17
CENPN-203ENST00000393335 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
CENPN-203ENST00000393335 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
CENPN-203ENST00000393335 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
CENPN-203ENST00000393335 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
CENPN-203ENST00000393335 CC2D2AQ9P2K1 1620 aa13.92□□□□□ -0.18
CENPN-203ENST00000393335 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
CENPN-203ENST00000393335 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
CENPN-203ENST00000393335 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
CENPN-203ENST00000393335 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.23
CENPN-203ENST00000393335 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
CENPN-203ENST00000393335 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
CENPN-203ENST00000393335 DNAJC5Q9H3Z4 198 aa13.53□□□□□ -0.24
CENPN-203ENST00000393335 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
CENPN-203ENST00000393335 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
CENPN-203ENST00000393335 ATAD2BQ9ULI0 1458 aa13.37□□□□□ -0.27
CENPN-203ENST00000393335 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
CENPN-203ENST00000393335 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
CENPN-203ENST00000393335 CUX2O14529 1486 aa13.33□□□□□ -0.28
CENPN-203ENST00000393335 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
CENPN-203ENST00000393335 KCNA4P22459 653 aa13.29□□□□□ -0.28
CENPN-203ENST00000393335 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
CENPN-203ENST00000393335 SMARCA4P51532 1647 aa13.27□□□□□ -0.28
CENPN-203ENST00000393335 NESP48681 1621 aa13.26□□□□□ -0.29
CENPN-203ENST00000393335 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
CENPN-203ENST00000393335 BAZ1BQ9UIG0 1483 aaKnown RBP13.22□□□□□ -0.29
CENPN-203ENST00000393335 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
CENPN-203ENST00000393335 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
CENPN-203ENST00000393335 MROH2BQ7Z745 1585 aa13.14□□□□□ -0.31
CENPN-203ENST00000393335 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
CENPN-203ENST00000393335 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
CENPN-203ENST00000393335 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
CENPN-203ENST00000393335 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
CENPN-203ENST00000393335 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.32
CENPN-203ENST00000393335 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
CENPN-203ENST00000393335 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
CENPN-203ENST00000393335 WIZO95785 1651 aa12.95□□□□□ -0.34
CENPN-203ENST00000393335 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
CENPN-203ENST00000393335 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
CENPN-203ENST00000393335 WDR62O43379 1518 aa12.89□□□□□ -0.35
CENPN-203ENST00000393335 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
CENPN-203ENST00000393335 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
CENPN-203ENST00000393335 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
CENPN-203ENST00000393335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
CENPN-203ENST00000393335 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
CENPN-203ENST00000393335 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
CENPN-203ENST00000393335 CFTRP13569 1480 aa12.83□□□□□ -0.36
CENPN-203ENST00000393335 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
CENPN-203ENST00000393335 OSCARQ8IYS5 282 aa12.77□□□□□ -0.36
CENPN-203ENST00000393335 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.36
CENPN-203ENST00000393335 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
CENPN-203ENST00000393335 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
CENPN-203ENST00000393335 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
CENPN-203ENST00000393335 ZNF608Q9ULD9 1512 aaPredicted RBP12.64□□□□□ -0.39
CENPN-203ENST00000393335 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
CENPN-203ENST00000393335 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
CENPN-203ENST00000393335 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
CENPN-203ENST00000393335 PRDM2Q13029 1718 aa12.55□□□□□ -0.4
CENPN-203ENST00000393335 RIMBP3CA6NJZ7 1639 aa12.54□□□□□ -0.4
CENPN-203ENST00000393335 RIMBP3BA6NNM3 1639 aa12.54□□□□□ -0.4
CENPN-203ENST00000393335 RIMBP3Q9UFD9 1639 aa12.54□□□□□ -0.4
CENPN-203ENST00000393335 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■■■■■ 34.7
CENPN-203ENST00000393335 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
CENPN-203ENST00000393335 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
CENPN-203ENST00000393335 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
CENPN-203ENST00000393335 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
CENPN-203ENST00000393335 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
CENPN-203ENST00000393335 DSG3P32926 999 aa12.51□□□□□ -0.41
CENPN-203ENST00000393335 FBLN2P98095 1184 aa12.51□□□□□ -0.41
CENPN-203ENST00000393335 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
CENPN-203ENST00000393335 CAPN15O75808 1086 aa12.47□□□□□ -0.41
CENPN-203ENST00000393335 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.41
CENPN-203ENST00000393335 POTEHQ6S545 545 aa12.46□□□□□ -0.42
CENPN-203ENST00000393335 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.42
CENPN-203ENST00000393335 TARBP1Q13395 1621 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms