RNA–Protein interactions for RNA: ENST00000393028.5

GIPC1-202, Transcript of GIPC PDZ domain containing family member 1, humanhuman

TSL 3 BASIC

Gene GIPC1, Length 1,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-202ENST00000393028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.44■■■□□ 2.464e-8■■■■■ 174.9
GIPC1-202ENST00000393028 DDX6P26196 483 aaKnown RBP eCLIP29.4■■■□□ 2.37e-7■■■■■ 53.3
GIPC1-202ENST00000393028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.27■■■□□ 2.922e-8■■■■■ 51
GIPC1-202ENST00000393028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.12■■■□□ 2.092e-9■■■■■ 44.1
GIPC1-202ENST00000393028 UPF1Q92900 1129 aaKnown RBP eCLIP36.26■■■■□ 3.41e-8■■■■■ 38.3
GIPC1-202ENST00000393028 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.68■■■□□ 2.54e-8■■■■■ 33.1
GIPC1-202ENST00000393028 ILF3Q12906 894 aaKnown RBP eCLIP27.66■■■□□ 2.022e-6■■■■□ 21.4
GIPC1-202ENST00000393028 PPIGQ13427 754 aaKnown RBP eCLIP30.76■■■□□ 2.511e-6■■■■□ 21
GIPC1-202ENST00000393028 ZC3H11AO75152 810 aaKnown RBP eCLIP30.42■■■□□ 2.469e-6■■■■□ 20.6
GIPC1-202ENST00000393028 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.72■■■□□ 2.673e-6■■■■□ 19.8
GIPC1-202ENST00000393028 PCBP2Q15366 365 aaKnown RBP eCLIP27.25■■□□□ 1.958e-8■■■□□ 15.4
GIPC1-202ENST00000393028 PABPC4Q13310 644 aaKnown RBP eCLIP32.72■■■□□ 2.832e-7■■□□□ 12
GIPC1-202ENST00000393028 LARP4Q71RC2 724 aaKnown RBP eCLIP26.76■■□□□ 1.873e-8■□□□□ 10.7
GIPC1-202ENST00000393028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.36■■□□□ 1.336e-7■□□□□ 9.8
GIPC1-202ENST00000393028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.37■■■□□ 2.299e-9■□□□□ 9.6
Retrieved 15 of 15 RNA–protein pairs in 41.4 ms