RNA–Protein interactions for RNA: ENST00000392676.7

ABCA5-201, Transcript of ATP binding cassette subfamily A member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA5, Length 8,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA5-201ENST00000392676 PRPF4O43172 522 aaKnown RBP eCLIP1.51□□□□□ -2.176e-9■□□□□ 10.3
ABCA5-201ENST00000392676 U2AF2P26368 475 aaKnown RBP eCLIP1.38□□□□□ -2.192e-8■■■□□ 14.7
ABCA5-201ENST00000392676 PTBP1P26599 531 aaKnown RBP eCLIP1.16□□□□□ -2.225e-8■■■■■ 27
ABCA5-201ENST00000392676 HLTFQ14527 1009 aaKnown RBP eCLIP1.38□□□□□ -2.192e-7■□□□□ 9.2
ABCA5-201ENST00000392676 HNRNPCP07910 306 aaKnown RBP eCLIP1.31□□□□□ -2.29e-7■■□□□ 12.3
ABCA5-201ENST00000392676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP1.61□□□□□ -2.159e-7■■■□□ 18.8
ABCA5-201ENST00000392676 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.48□□□□□ -2.172e-6■■■■□ 21.9
ABCA5-201ENST00000392676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.81□□□□□ -2.283e-6■■■■□ 23.2
ABCA5-201ENST00000392676 AQRO60306 1485 aaKnown RBP eCLIP1.27□□□□□ -2.214e-6■■■■□ 24.8
ABCA5-201ENST00000392676 SF3A3Q12874 501 aaKnown RBP eCLIP1.31□□□□□ -2.25e-6■■■■■ 35.2
ABCA5-201ENST00000392676 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.4□□□□□ -2.195e-6■□□□□ 8.4
Retrieved 11 of 11 RNA–protein pairs in 4.2 ms