RNA–Protein interactions for RNA: ENST00000392367.4

RAN-201, Transcript of RAN, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAN, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAN-201ENST00000392367 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.174e-8■■■■■ 106.1
RAN-201ENST00000392367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.024e-15■■■■■ 88.9
RAN-201ENST00000392367 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.827e-11■■■■■ 58.8
RAN-201ENST00000392367 SF3B1O75533 1304 aaKnown RBP eCLIP9.22□□□□□ -0.932e-6■■■■■ 43.1
RAN-201ENST00000392367 RBM22Q9NW64 420 aaKnown RBP eCLIP7.79□□□□□ -1.163e-6■■■■■ 40.4
RAN-201ENST00000392367 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.694e-12■■■■■ 37
RAN-201ENST00000392367 SUB1P53999 127 aaKnown RBP eCLIP5.41□□□□□ -1.543e-13■■■■■ 37
RAN-201ENST00000392367 GTF2F1P35269 517 aaKnown RBP eCLIP9.95□□□□□ -0.826e-14■■■■■ 30.3
RAN-201ENST00000392367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.03□□□□□ -1.121e-9■■■■■ 30.1
RAN-201ENST00000392367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.72□□□□□ -0.692e-7■■■■■ 27.5
RAN-201ENST00000392367 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■■■■■ 27.5
RAN-201ENST00000392367 PCBP2Q15366 365 aaKnown RBP eCLIP7.94□□□□□ -1.143e-12■■■■■ 27.4
RAN-201ENST00000392367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.6□□□□□ -1.192e-8■■■■■ 26.9
RAN-201ENST00000392367 EFTUD2Q15029 972 aaKnown RBP eCLIP7.35□□□□□ -1.234e-7■■■■□ 22.9
RAN-201ENST00000392367 RPS3P23396 243 aaKnown RBP eCLIP7.36□□□□□ -1.231e-8■■■■□ 21.5
RAN-201ENST00000392367 DDX3XO00571 662 aaKnown RBP eCLIP7.74□□□□□ -1.171e-28■■■■□ 20.8
RAN-201ENST00000392367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.47□□□□□ -0.891e-19■■■■□ 19.8
RAN-201ENST00000392367 RBFOX2O43251 390 aaKnown RBP eCLIP5.55□□□□□ -1.523e-7■■■□□ 19.2
RAN-201ENST00000392367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.561e-10■■■□□ 18.3
RAN-201ENST00000392367 EIF3GO75821 320 aaKnown RBP eCLIP5.03□□□□□ -1.67e-7■■■□□ 18.2
RAN-201ENST00000392367 FTOQ9C0B1 505 aaKnown RBP eCLIP10.14□□□□□ -0.791e-6■■■□□ 17.4
RAN-201ENST00000392367 ZRANB2O95218 330 aaKnown RBP eCLIP7.89□□□□□ -1.154e-10■■■□□ 16.9
RAN-201ENST00000392367 SF3B4Q15427 424 aaKnown RBP eCLIP7.57□□□□□ -1.25e-9■■■□□ 16.8
RAN-201ENST00000392367 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■■■□□ 15.9
RAN-201ENST00000392367 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.65□□□□□ -1.185e-6■■■□□ 15.7
RAN-201ENST00000392367 GPKOWQ92917 476 aaPredicted RBP eCLIP9.57□□□□□ -0.888e-7■■□□□ 14.4
RAN-201ENST00000392367 CDC40O60508 579 aaKnown RBP eCLIP7.87□□□□□ -1.158e-7■■□□□ 14.2
RAN-201ENST00000392367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.272e-11■■□□□ 13.8
RAN-201ENST00000392367 NOLC1Q14978 699 aaKnown RBP eCLIP8.8□□□□□ -12e-25■■□□□ 13.8
RAN-201ENST00000392367 PUM1Q14671 1186 aaKnown RBP eCLIP9.98□□□□□ -0.811e-6■■□□□ 13.6
RAN-201ENST00000392367 NKRFO15226 690 aaKnown RBP eCLIP9.83□□□□□ -0.848e-9■■□□□ 13.5
RAN-201ENST00000392367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.34□□□□□ -1.238e-10■■□□□ 13.5
RAN-201ENST00000392367 PRPF4O43172 522 aaKnown RBP eCLIP7.73□□□□□ -1.171e-8■■□□□ 13.4
RAN-201ENST00000392367 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.4□□□□□ -0.745e-8■■□□□ 12.5
RAN-201ENST00000392367 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.032e-6■■□□□ 11.9
RAN-201ENST00000392367 SMNDC1O75940 238 aaKnown RBP eCLIP7.55□□□□□ -1.21e-5■■□□□ 11.9
RAN-201ENST00000392367 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.412e-16■□□□□ 11.3
RAN-201ENST00000392367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.21□□□□□ -0.133e-9■□□□□ 10.9
RAN-201ENST00000392367 LARP4Q71RC2 724 aaKnown RBP eCLIP7.19□□□□□ -1.265e-22■□□□□ 10.6
RAN-201ENST00000392367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.192e-10■□□□□ 10.6
RAN-201ENST00000392367 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.37□□□□□ -1.392e-6■□□□□ 10.2
RAN-201ENST00000392367 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.07□□□□□ -1.122e-11■□□□□ 10.2
RAN-201ENST00000392367 PABPC4Q13310 644 aaKnown RBP eCLIP10.48□□□□□ -0.738e-27■□□□□ 10.1
RAN-201ENST00000392367 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.034e-14■□□□□ 10
RAN-201ENST00000392367 SRSF7Q16629 238 aaKnown RBP eCLIP6.52□□□□□ -1.378e-16■□□□□ 9.8
RAN-201ENST00000392367 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.31□□□□□ -0.922e-8■□□□□ 9.5
RAN-201ENST00000392367 RBM15Q96T37 977 aaKnown RBP eCLIP8.31□□□□□ -1.081e-7■□□□□ 8.4
Retrieved 47 of 47 RNA–protein pairs in 11.1 ms