RNA–Protein interactions for RNA: ENST00000392201.1

COX6B1-202, Transcript of cytochrome c oxidase subunit 6B1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COX6B1, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6B1-202ENST00000392201 SND1Q7KZF4 910 aaKnown RBP eCLIP9.04□□□□□ -0.965e-30■■□□□ 11.9
COX6B1-202ENST00000392201 PCBP1Q15365 356 aaKnown RBP eCLIP9.52□□□□□ -0.898e-26■■■■■ 107.1
COX6B1-202ENST00000392201 PCBP2Q15366 365 aaKnown RBP eCLIP8.41□□□□□ -1.061e-25■□□□□ 10
COX6B1-202ENST00000392201 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.71□□□□□ -1.022e-22■□□□□ 8.3
COX6B1-202ENST00000392201 YBX3P16989 372 aaKnown RBP eCLIP10.72□□□□□ -0.692e-22■■□□□ 11.8
COX6B1-202ENST00000392201 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.792e-17■■■□□ 16.3
COX6B1-202ENST00000392201 RPS3P23396 243 aaKnown RBP eCLIP8.58□□□□□ -1.046e-15■■■■■ 36.4
COX6B1-202ENST00000392201 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.932e-14■■□□□ 14.3
COX6B1-202ENST00000392201 LARP4Q71RC2 724 aaKnown RBP eCLIP8.26□□□□□ -1.091e-12■■■■■ 33.5
COX6B1-202ENST00000392201 SF3B4Q15427 424 aaKnown RBP eCLIP7.74□□□□□ -1.174e-12■■□□□ 13.6
COX6B1-202ENST00000392201 ZC3H11AO75152 810 aaKnown RBP eCLIP9.39□□□□□ -0.916e-12■□□□□ 10.1
COX6B1-202ENST00000392201 DDX6P26196 483 aaKnown RBP eCLIP9.06□□□□□ -0.962e-9■□□□□ 11
COX6B1-202ENST00000392201 AKAP1Q92667 903 aaKnown RBP eCLIP7.47□□□□□ -1.219e-9■■■□□ 14.9
COX6B1-202ENST00000392201 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.781e-8■■□□□ 12.2
COX6B1-202ENST00000392201 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.53□□□□□ -0.722e-8■□□□□ 9.7
COX6B1-202ENST00000392201 TARDBPQ13148 414 aaKnown RBP eCLIP8.3□□□□□ -1.083e-8■□□□□ 8.8
COX6B1-202ENST00000392201 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.763e-8■■■□□ 15.3
COX6B1-202ENST00000392201 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.67□□□□□ -1.022e-7■■■■□ 21.8
COX6B1-202ENST00000392201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.233e-7■□□□□ 10.5
COX6B1-202ENST00000392201 PTBP1P26599 531 aaKnown RBP eCLIP7.15□□□□□ -1.265e-7■■■■■ 31
COX6B1-202ENST00000392201 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.24□□□□□ -0.935e-7■□□□□ 10.4
COX6B1-202ENST00000392201 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.83□□□□□ -1.161e-6■□□□□ 9.6
COX6B1-202ENST00000392201 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■■□□ 14.8
COX6B1-202ENST00000392201 NIPBLQ6KC79 2804 aaeCLIP7.24□□□□□ -1.251e-6■■□□□ 12.8
COX6B1-202ENST00000392201 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.17□□□□□ -0.942e-6■□□□□ 8.6
COX6B1-202ENST00000392201 PUM1Q14671 1186 aaKnown RBP eCLIP8.31□□□□□ -1.082e-6■□□□□ 8.9
COX6B1-202ENST00000392201 GPKOWQ92917 476 aaPredicted RBP eCLIP10.09□□□□□ -0.792e-6■■■□□ 14.8
COX6B1-202ENST00000392201 EIF3GO75821 320 aaKnown RBP eCLIP6.6□□□□□ -1.352e-6■■□□□ 12.1
COX6B1-202ENST00000392201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■□□□□ 9.3
Retrieved 29 of 29 RNA–protein pairs in 8.9 ms