RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.172e-9■■■■■ 218.8
LRRFIP1-204ENST00000392000 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.22■□□□□ 0.033e-6■■■■■ 97.5
LRRFIP1-204ENST00000392000 FUBP3Q96I24 572 aaKnown RBP eCLIP14.05□□□□□ -0.163e-12■■■■■ 57.9
LRRFIP1-204ENST00000392000 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■■■■■ 56.2
LRRFIP1-204ENST00000392000 TIAL1Q01085 375 aaKnown RBP eCLIP14.3□□□□□ -0.122e-9■■■■■ 31.3
LRRFIP1-204ENST00000392000 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.122e-6■■■■■ 29.6
LRRFIP1-204ENST00000392000 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■■■ 29.5
LRRFIP1-204ENST00000392000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.92□□□□□ -0.185e-7■■■■■ 28.4
LRRFIP1-204ENST00000392000 TRA2AQ13595 282 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■■ 27.7
LRRFIP1-204ENST00000392000 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.791e-7■■■■■ 27.6
LRRFIP1-204ENST00000392000 DDX3XO00571 662 aaKnown RBP eCLIP15.76■□□□□ 0.111e-15■■■■■ 27.4
LRRFIP1-204ENST00000392000 PCBP2Q15366 365 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■■□ 26
LRRFIP1-204ENST00000392000 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.77□□□□□ -0.21e-7■■■■□ 25.6
LRRFIP1-204ENST00000392000 ZNF622Q969S3 477 aaKnown RBP eCLIP15.75■□□□□ 0.114e-7■■■■□ 24.3
LRRFIP1-204ENST00000392000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.37■□□□□ 0.053e-6■■■■□ 23.1
LRRFIP1-204ENST00000392000 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.64e-7■■■■□ 22.8
LRRFIP1-204ENST00000392000 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.263e-6■■■■□ 22.1
LRRFIP1-204ENST00000392000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.248e-8■■■■□ 21.6
LRRFIP1-204ENST00000392000 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.186e-7■■■■□ 21.6
LRRFIP1-204ENST00000392000 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.38□□□□□ -0.113e-6■■■■□ 20.9
LRRFIP1-204ENST00000392000 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.715e-6■■■■□ 20.7
LRRFIP1-204ENST00000392000 QKIQ96PU8 341 aaKnown RBP eCLIP14.74□□□□□ -0.057e-8■■■□□ 17.4
LRRFIP1-204ENST00000392000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.82■□□□□ 0.288e-7■■■□□ 17.1
LRRFIP1-204ENST00000392000 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■□□□ 13.8
LRRFIP1-204ENST00000392000 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.39■□□□□ 0.054e-7■■□□□ 13.5
LRRFIP1-204ENST00000392000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■□□□ 12.8
LRRFIP1-204ENST00000392000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.52■□□□□ 0.073e-8■■□□□ 12.6
LRRFIP1-204ENST00000392000 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.166e-7■■□□□ 12.4
LRRFIP1-204ENST00000392000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.79□□□□□ -0.524e-7■■□□□ 12.1
LRRFIP1-204ENST00000392000 RBM22Q9NW64 420 aaKnown RBP eCLIP14.62□□□□□ -0.072e-8■■□□□ 11.5
LRRFIP1-204ENST00000392000 KHSRPQ92945 711 aaKnown RBP eCLIP14.81□□□□□ -0.048e-10■□□□□ 11
LRRFIP1-204ENST00000392000 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.251e-7■□□□□ 11
LRRFIP1-204ENST00000392000 HLTFQ14527 1009 aaKnown RBP eCLIP16.24■□□□□ 0.192e-7■□□□□ 9.9
LRRFIP1-204ENST00000392000 HNRNPKP61978 463 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■□□□□ 9.7
LRRFIP1-204ENST00000392000 AGGF1Q8N302 714 aaeCLIP15.32■□□□□ 0.044e-8■□□□□ 9.4
LRRFIP1-204ENST00000392000 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.122e-8■□□□□ 8.3
Retrieved 36 of 36 RNA–protein pairs in 9.1 ms