RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
LRRFIP1-204ENST00000392000 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
LRRFIP1-204ENST00000392000 MT1LQ93083 61 aa4.91□□□□□ -1.62
LRRFIP1-204ENST00000392000 MT1GP13640 62 aa4.88□□□□□ -1.63
LRRFIP1-204ENST00000392000 MT1EP04732 61 aa4.88□□□□□ -1.63
LRRFIP1-204ENST00000392000 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
LRRFIP1-204ENST00000392000 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
LRRFIP1-204ENST00000392000 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
LRRFIP1-204ENST00000392000 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
LRRFIP1-204ENST00000392000 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
LRRFIP1-204ENST00000392000 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
LRRFIP1-204ENST00000392000 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.66
LRRFIP1-204ENST00000392000 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
LRRFIP1-204ENST00000392000 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
LRRFIP1-204ENST00000392000 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
LRRFIP1-204ENST00000392000 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.68
LRRFIP1-204ENST00000392000 MT1MQ8N339 61 aa4.58□□□□□ -1.68
LRRFIP1-204ENST00000392000 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
LRRFIP1-204ENST00000392000 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
LRRFIP1-204ENST00000392000 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
LRRFIP1-204ENST00000392000 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
LRRFIP1-204ENST00000392000 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
LRRFIP1-204ENST00000392000 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
LRRFIP1-204ENST00000392000 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
LRRFIP1-204ENST00000392000 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
LRRFIP1-204ENST00000392000 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
LRRFIP1-204ENST00000392000 PRM1P04553 51 aa4.22□□□□□ -1.73
LRRFIP1-204ENST00000392000 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
LRRFIP1-204ENST00000392000 SPRR2EP22531 72 aa4.07□□□□□ -1.76
LRRFIP1-204ENST00000392000 SPRR2BP35325 72 aa4.07□□□□□ -1.76
LRRFIP1-204ENST00000392000 SPRR2AP35326 72 aa4.07□□□□□ -1.76
LRRFIP1-204ENST00000392000 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
LRRFIP1-204ENST00000392000 MT1AP04731 61 aa4.03□□□□□ -1.76
LRRFIP1-204ENST00000392000 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
LRRFIP1-204ENST00000392000 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
LRRFIP1-204ENST00000392000 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
LRRFIP1-204ENST00000392000 SPRR2DP22532 72 aa3.86□□□□□ -1.79
LRRFIP1-204ENST00000392000 NEBP20929 6669 aa3.84□□□□□ -1.79
LRRFIP1-204ENST00000392000 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
LRRFIP1-204ENST00000392000 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
LRRFIP1-204ENST00000392000 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
LRRFIP1-204ENST00000392000 MT3P25713 68 aa3.68□□□□□ -1.82
LRRFIP1-204ENST00000392000 MT4P47944 62 aa3.62□□□□□ -1.83
LRRFIP1-204ENST00000392000 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
LRRFIP1-204ENST00000392000 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
LRRFIP1-204ENST00000392000 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
LRRFIP1-204ENST00000392000 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
LRRFIP1-204ENST00000392000 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
LRRFIP1-204ENST00000392000 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
LRRFIP1-204ENST00000392000 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
LRRFIP1-204ENST00000392000 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
LRRFIP1-204ENST00000392000 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
LRRFIP1-204ENST00000392000 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
LRRFIP1-204ENST00000392000 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
LRRFIP1-204ENST00000392000 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
LRRFIP1-204ENST00000392000 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
LRRFIP1-204ENST00000392000 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
LRRFIP1-204ENST00000392000 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
LRRFIP1-204ENST00000392000 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
LRRFIP1-204ENST00000392000 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
LRRFIP1-204ENST00000392000 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
LRRFIP1-204ENST00000392000 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
LRRFIP1-204ENST00000392000 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
LRRFIP1-204ENST00000392000 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
LRRFIP1-204ENST00000392000 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
LRRFIP1-204ENST00000392000 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
LRRFIP1-204ENST00000392000 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
LRRFIP1-204ENST00000392000 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
LRRFIP1-204ENST00000392000 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
LRRFIP1-204ENST00000392000 KRTAP5-8O75690 187 aa2.57□□□□□ -2
LRRFIP1-204ENST00000392000 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
LRRFIP1-204ENST00000392000 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
LRRFIP1-204ENST00000392000 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
LRRFIP1-204ENST00000392000 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
LRRFIP1-204ENST00000392000 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
LRRFIP1-204ENST00000392000 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
LRRFIP1-204ENST00000392000 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 121.5 ms