RNA–Protein interactions for RNA: ENST00000391299.1

RNA5SP53-201, Transcript of RNA, 5S ribosomal pseudogene 53, humanhuman

BASIC

Gene RNA5SP53, Length 120 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP53-201ENST00000391299 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
RNA5SP53-201ENST00000391299 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
RNA5SP53-201ENST00000391299 ABCC9O60706 1549 aa14.93□□□□□ -0.02
RNA5SP53-201ENST00000391299 RB1CC1Q8TDY2 1594 aa14.44□□□□□ -0.1
RNA5SP53-201ENST00000391299 NACADO15069 1562 aa14.41□□□□□ -0.1
RNA5SP53-201ENST00000391299 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
RNA5SP53-201ENST00000391299 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
RNA5SP53-201ENST00000391299 ZCCHC6Q5VYS8 1495 aaKnown RBP14.28□□□□□ -0.12
RNA5SP53-201ENST00000391299 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
RNA5SP53-201ENST00000391299 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
RNA5SP53-201ENST00000391299 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
RNA5SP53-201ENST00000391299 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
RNA5SP53-201ENST00000391299 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNA5SP53-201ENST00000391299 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
RNA5SP53-201ENST00000391299 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.2
RNA5SP53-201ENST00000391299 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
RNA5SP53-201ENST00000391299 CC2D2AQ9P2K1 1620 aa13.55□□□□□ -0.24
RNA5SP53-201ENST00000391299 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
RNA5SP53-201ENST00000391299 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
RNA5SP53-201ENST00000391299 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
RNA5SP53-201ENST00000391299 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
RNA5SP53-201ENST00000391299 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
RNA5SP53-201ENST00000391299 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
RNA5SP53-201ENST00000391299 PEG3Q9GZU2 1588 aa13.22□□□□□ -0.29
RNA5SP53-201ENST00000391299 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
RNA5SP53-201ENST00000391299 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
RNA5SP53-201ENST00000391299 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
RNA5SP53-201ENST00000391299 WIZO95785 1651 aa13.09□□□□□ -0.31
RNA5SP53-201ENST00000391299 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
RNA5SP53-201ENST00000391299 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
RNA5SP53-201ENST00000391299 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
RNA5SP53-201ENST00000391299 ERCC6Q03468 1493 aa12.93□□□□□ -0.34
RNA5SP53-201ENST00000391299 NESP48681 1621 aa12.89□□□□□ -0.35
RNA5SP53-201ENST00000391299 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
RNA5SP53-201ENST00000391299 PDS5BQ9NTI5 1447 aa12.86□□□□□ -0.35
RNA5SP53-201ENST00000391299 KIF21AQ7Z4S6 1674 aa12.83□□□□□ -0.35
RNA5SP53-201ENST00000391299 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
RNA5SP53-201ENST00000391299 CUX2O14529 1486 aa12.81□□□□□ -0.36
RNA5SP53-201ENST00000391299 CFTRP13569 1480 aa12.78□□□□□ -0.36
RNA5SP53-201ENST00000391299 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
RNA5SP53-201ENST00000391299 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.37
RNA5SP53-201ENST00000391299 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
RNA5SP53-201ENST00000391299 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
RNA5SP53-201ENST00000391299 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
RNA5SP53-201ENST00000391299 SUPT5HO00267 1087 aaKnown RBP12.68□□□□□ -0.38
RNA5SP53-201ENST00000391299 WDR62O43379 1518 aa12.67□□□□□ -0.38
RNA5SP53-201ENST00000391299 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
RNA5SP53-201ENST00000391299 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
RNA5SP53-201ENST00000391299 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
RNA5SP53-201ENST00000391299 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.4
RNA5SP53-201ENST00000391299 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
RNA5SP53-201ENST00000391299 IFT140Q96RY7 1462 aa12.46□□□□□ -0.42
RNA5SP53-201ENST00000391299 CUX1P39880 1505 aa12.39□□□□□ -0.43
RNA5SP53-201ENST00000391299 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
RNA5SP53-201ENST00000391299 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
RNA5SP53-201ENST00000391299 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
RNA5SP53-201ENST00000391299 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
RNA5SP53-201ENST00000391299 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
RNA5SP53-201ENST00000391299 SOGA1O94964 1423 aa12.35□□□□□ -0.43
RNA5SP53-201ENST00000391299 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
RNA5SP53-201ENST00000391299 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.43
RNA5SP53-201ENST00000391299 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
RNA5SP53-201ENST00000391299 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
RNA5SP53-201ENST00000391299 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
RNA5SP53-201ENST00000391299 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
RNA5SP53-201ENST00000391299 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.44
RNA5SP53-201ENST00000391299 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
RNA5SP53-201ENST00000391299 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
RNA5SP53-201ENST00000391299 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
RNA5SP53-201ENST00000391299 CHD1O14646 1710 aa12.25□□□□□ -0.45
RNA5SP53-201ENST00000391299 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
RNA5SP53-201ENST00000391299 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
RNA5SP53-201ENST00000391299 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
RNA5SP53-201ENST00000391299 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
RNA5SP53-201ENST00000391299 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
RNA5SP53-201ENST00000391299 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
RNA5SP53-201ENST00000391299 FBLN2P98095 1184 aa12.17□□□□□ -0.46
RNA5SP53-201ENST00000391299 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
RNA5SP53-201ENST00000391299 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
RNA5SP53-201ENST00000391299 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
RNA5SP53-201ENST00000391299 ADAMTS12P58397 1594 aa12.11□□□□□ -0.47
RNA5SP53-201ENST00000391299 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
RNA5SP53-201ENST00000391299 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
RNA5SP53-201ENST00000391299 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
RNA5SP53-201ENST00000391299 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
RNA5SP53-201ENST00000391299 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
RNA5SP53-201ENST00000391299 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
RNA5SP53-201ENST00000391299 CUL7Q14999 1698 aa12.06□□□□□ -0.48
RNA5SP53-201ENST00000391299 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
RNA5SP53-201ENST00000391299 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
RNA5SP53-201ENST00000391299 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
RNA5SP53-201ENST00000391299 NUP160Q12769 1436 aa11.99□□□□□ -0.49
RNA5SP53-201ENST00000391299 CEP170Q5SW79 1584 aa11.99□□□□□ -0.49
RNA5SP53-201ENST00000391299 IGF1RP08069 1367 aa11.98□□□□□ -0.49
RNA5SP53-201ENST00000391299 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
RNA5SP53-201ENST00000391299 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
RNA5SP53-201ENST00000391299 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
RNA5SP53-201ENST00000391299 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
RNA5SP53-201ENST00000391299 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
RNA5SP53-201ENST00000391299 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms