RNA–Protein interactions for RNA: ENST00000389908.7

RUBCNL-205, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene RUBCNL, Length 3,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCNL-205ENST00000389908 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
RUBCNL-205ENST00000389908 DCAF8L2P0C7V8 631 aa11.2□□□□□ -0.62
RUBCNL-205ENST00000389908 SHROOM4Q9ULL8 1493 aa10.78□□□□□ -0.68
RUBCNL-205ENST00000389908 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
RUBCNL-205ENST00000389908 ABCC9O60706 1549 aa10.09□□□□□ -0.79
RUBCNL-205ENST00000389908 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
RUBCNL-205ENST00000389908 FAM9AQ8IZU1 332 aaPredicted RBP9.99□□□□□ -0.81
RUBCNL-205ENST00000389908 ZCCHC6Q5VYS8 1495 aaKnown RBP9.98□□□□□ -0.81
RUBCNL-205ENST00000389908 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
RUBCNL-205ENST00000389908 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
RUBCNL-205ENST00000389908 CHIC1Q5VXU3 224 aa9.92□□□□□ -0.82
RUBCNL-205ENST00000389908 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
RUBCNL-205ENST00000389908 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
RUBCNL-205ENST00000389908 SCRIBQ14160 1630 aa9.74□□□□□ -0.85
RUBCNL-205ENST00000389908 TTBK1Q5TCY1 1321 aaPredicted RBP9.7□□□□□ -0.86
RUBCNL-205ENST00000389908 LOC105371045A0A1W2PR82 267 aa9.7□□□□□ -0.86
RUBCNL-205ENST00000389908 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
RUBCNL-205ENST00000389908 APLP2Q06481 763 aa9.67□□□□□ -0.86
RUBCNL-205ENST00000389908 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
RUBCNL-205ENST00000389908 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
RUBCNL-205ENST00000389908 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
RUBCNL-205ENST00000389908 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
RUBCNL-205ENST00000389908 NACADO15069 1562 aa9.56□□□□□ -0.88
RUBCNL-205ENST00000389908 RB1CC1Q8TDY2 1594 aa9.55□□□□□ -0.88
RUBCNL-205ENST00000389908 RSF1Q96T23 1441 aaPredicted RBP9.5□□□□□ -0.89
RUBCNL-205ENST00000389908 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
RUBCNL-205ENST00000389908 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
RUBCNL-205ENST00000389908 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
RUBCNL-205ENST00000389908 CCER1Q8TC90 406 aaPredicted RBP9.42□□□□□ -0.9
RUBCNL-205ENST00000389908 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
RUBCNL-205ENST00000389908 MYO15BQ96JP2 1530 aa9.37□□□□□ -0.91
RUBCNL-205ENST00000389908 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
RUBCNL-205ENST00000389908 CSRNP3Q8WYN3 585 aa9.34□□□□□ -0.91
RUBCNL-205ENST00000389908 HRCP23327 699 aa9.32□□□□□ -0.92
RUBCNL-205ENST00000389908 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
RUBCNL-205ENST00000389908 MROH2BQ7Z745 1585 aa9.3□□□□□ -0.92
RUBCNL-205ENST00000389908 HNRNPUL2Q1KMD3 747 aaKnown RBP9.27□□□□□ -0.93
RUBCNL-205ENST00000389908 ITGAEP38570 1179 aa9.26□□□□□ -0.93
RUBCNL-205ENST00000389908 BAZ1BQ9UIG0 1483 aaKnown RBP9.24□□□□□ -0.93
RUBCNL-205ENST00000389908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
RUBCNL-205ENST00000389908 WRNQ14191 1432 aaPredicted RBP eCLIP9.17□□□□□ -0.94
RUBCNL-205ENST00000389908 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.94
RUBCNL-205ENST00000389908 WIZO95785 1651 aa9.15□□□□□ -0.94
RUBCNL-205ENST00000389908 P3H3Q8IVL6 736 aa9.15□□□□□ -0.95
RUBCNL-205ENST00000389908 FBLN2P98095 1184 aa9.12□□□□□ -0.95
RUBCNL-205ENST00000389908 FAM50AQ14320 339 aaKnown RBP9.1□□□□□ -0.95
RUBCNL-205ENST00000389908 EEA1Q15075 1411 aa9.09□□□□□ -0.95
RUBCNL-205ENST00000389908 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
RUBCNL-205ENST00000389908 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
RUBCNL-205ENST00000389908 SMARCA4P51532 1647 aa9.07□□□□□ -0.96
RUBCNL-205ENST00000389908 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
RUBCNL-205ENST00000389908 SOGA1O94964 1423 aa9.06□□□□□ -0.96
RUBCNL-205ENST00000389908 ATAD2BQ9ULI0 1458 aa9.06□□□□□ -0.96
RUBCNL-205ENST00000389908 ABCC8Q09428 1581 aa9.06□□□□□ -0.96
RUBCNL-205ENST00000389908 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
RUBCNL-205ENST00000389908 CLIP1P30622 1438 aa9.04□□□□□ -0.96
RUBCNL-205ENST00000389908 ARID3CA6NKF2 412 aa9.04□□□□□ -0.96
RUBCNL-205ENST00000389908 GOLGA3Q08378 1498 aa9.04□□□□□ -0.96
RUBCNL-205ENST00000389908 CENPBP07199 599 aaPredicted RBP9.02□□□□□ -0.97
RUBCNL-205ENST00000389908 KIF27Q86VH2 1401 aa9.01□□□□□ -0.97
RUBCNL-205ENST00000389908 TNIKQ9UKE5 1360 aa9.01□□□□□ -0.97
RUBCNL-205ENST00000389908 PHF23Q9BUL5 403 aaPredicted RBP9.01□□□□□ -0.97
RUBCNL-205ENST00000389908 YTHDC1Q96MU7 727 aaKnown RBP9□□□□□ -0.97
RUBCNL-205ENST00000389908 CEP164Q9UPV0 1460 aa8.99□□□□□ -0.97
RUBCNL-205ENST00000389908 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
RUBCNL-205ENST00000389908 NEUROD1Q13562 356 aa8.94□□□□□ -0.98
RUBCNL-205ENST00000389908 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
RUBCNL-205ENST00000389908 CUX2O14529 1486 aa8.93□□□□□ -0.98
RUBCNL-205ENST00000389908 CADPSQ9ULU8 1353 aa8.93□□□□□ -0.98
RUBCNL-205ENST00000389908 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
RUBCNL-205ENST00000389908 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
RUBCNL-205ENST00000389908 CHMP7Q8WUX9 453 aaPredicted RBP8.91□□□□□ -0.98
RUBCNL-205ENST00000389908 CARMIL1Q5VZK9 1371 aa8.89□□□□□ -0.99
RUBCNL-205ENST00000389908 CDK11AQ9UQ88 783 aaPredicted RBP8.89□□□□□ -0.99
RUBCNL-205ENST00000389908 RUSC2Q8N2Y8 1516 aa8.88□□□□□ -0.99
RUBCNL-205ENST00000389908 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
RUBCNL-205ENST00000389908 NCAPD3P42695 1498 aa8.88□□□□□ -0.99
RUBCNL-205ENST00000389908 EIF4G1Q04637 1599 aaKnown RBP8.88□□□□□ -0.99
RUBCNL-205ENST00000389908 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
RUBCNL-205ENST00000389908 POLR3GLQ9BT43 218 aa8.87□□□□□ -0.99
RUBCNL-205ENST00000389908 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
RUBCNL-205ENST00000389908 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
RUBCNL-205ENST00000389908 ERCC6Q03468 1493 aa8.86□□□□□ -0.99
RUBCNL-205ENST00000389908 PDS5BQ9NTI5 1447 aa8.86□□□□□ -0.99
RUBCNL-205ENST00000389908 TDRD9Q8NDG6 1382 aaKnown RBP8.85□□□□□ -0.99
RUBCNL-205ENST00000389908 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
RUBCNL-205ENST00000389908 RAPGEF2Q9Y4G8 1499 aa8.82□□□□□ -1
RUBCNL-205ENST00000389908 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
RUBCNL-205ENST00000389908 VPS8Q8N3P4 1428 aa8.81□□□□□ -1
RUBCNL-205ENST00000389908 CNGB1Q14028 1251 aaPredicted RBP8.81□□□□□ -1
RUBCNL-205ENST00000389908 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
RUBCNL-205ENST00000389908 ZNF326Q5BKZ1 582 aaKnown RBP8.79□□□□□ -1
RUBCNL-205ENST00000389908 KANK4Q5T7N3 995 aaPredicted RBP8.77□□□□□ -1.01
RUBCNL-205ENST00000389908 FHAD1B1AJZ9 1412 aa8.76□□□□□ -1.01
RUBCNL-205ENST00000389908 CFTRP13569 1480 aa8.75□□□□□ -1.01
RUBCNL-205ENST00000389908 NEFLP07196 543 aa8.75□□□□□ -1.01
RUBCNL-205ENST00000389908 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
RUBCNL-205ENST00000389908 HMGXB3Q12766 1538 aa8.73□□□□□ -1.01
RUBCNL-205ENST00000389908 FGD5Q6ZNL6 1462 aa8.73□□□□□ -1.01
RUBCNL-205ENST00000389908 SYNJ1O43426 1573 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms