RNA–Protein interactions for RNA: ENST00000389834.8

TMEM87A-202, Transcript of transmembrane protein 87A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM87A, Length 3,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-202ENST00000389834 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
TMEM87A-202ENST00000389834 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
TMEM87A-202ENST00000389834 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
TMEM87A-202ENST00000389834 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
TMEM87A-202ENST00000389834 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
TMEM87A-202ENST00000389834 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
TMEM87A-202ENST00000389834 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
TMEM87A-202ENST00000389834 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
TMEM87A-202ENST00000389834 HRCP23327 699 aa14.26□□□□□ -0.13
TMEM87A-202ENST00000389834 PCGF6Q9BYE7 350 aa14.25□□□□□ -0.13
TMEM87A-202ENST00000389834 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
TMEM87A-202ENST00000389834 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
TMEM87A-202ENST00000389834 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.15
TMEM87A-202ENST00000389834 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
TMEM87A-202ENST00000389834 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
TMEM87A-202ENST00000389834 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
TMEM87A-202ENST00000389834 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.2
TMEM87A-202ENST00000389834 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
TMEM87A-202ENST00000389834 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
TMEM87A-202ENST00000389834 ABCC9O60706 1549 aa13.76□□□□□ -0.21
TMEM87A-202ENST00000389834 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
TMEM87A-202ENST00000389834 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
TMEM87A-202ENST00000389834 RB1CC1Q8TDY2 1594 aa13.67□□□□□ -0.22
TMEM87A-202ENST00000389834 MYT1Q01538 1121 aa13.55□□□□□ -0.24
TMEM87A-202ENST00000389834 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
TMEM87A-202ENST00000389834 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
TMEM87A-202ENST00000389834 WIZO95785 1651 aa13.41□□□□□ -0.26
TMEM87A-202ENST00000389834 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
TMEM87A-202ENST00000389834 TTBK1Q5TCY1 1321 aaPredicted RBP13.36□□□□□ -0.27
TMEM87A-202ENST00000389834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
TMEM87A-202ENST00000389834 NEUROD1Q13562 356 aa13.3□□□□□ -0.28
TMEM87A-202ENST00000389834 NACADO15069 1562 aa13.27□□□□□ -0.28
TMEM87A-202ENST00000389834 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
TMEM87A-202ENST00000389834 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
TMEM87A-202ENST00000389834 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
TMEM87A-202ENST00000389834 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
TMEM87A-202ENST00000389834 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
TMEM87A-202ENST00000389834 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.3
TMEM87A-202ENST00000389834 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
TMEM87A-202ENST00000389834 SOGA1O94964 1423 aa13.15□□□□□ -0.31
TMEM87A-202ENST00000389834 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
TMEM87A-202ENST00000389834 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
TMEM87A-202ENST00000389834 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
TMEM87A-202ENST00000389834 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
TMEM87A-202ENST00000389834 SMARCA2P51531 1590 aa13.06□□□□□ -0.32
TMEM87A-202ENST00000389834 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
TMEM87A-202ENST00000389834 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
TMEM87A-202ENST00000389834 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM87A-202ENST00000389834 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
TMEM87A-202ENST00000389834 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
TMEM87A-202ENST00000389834 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
TMEM87A-202ENST00000389834 UNC13AQ9UPW8 1703 aa12.98□□□□□ -0.33
TMEM87A-202ENST00000389834 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
TMEM87A-202ENST00000389834 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
TMEM87A-202ENST00000389834 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
TMEM87A-202ENST00000389834 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
TMEM87A-202ENST00000389834 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
TMEM87A-202ENST00000389834 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
TMEM87A-202ENST00000389834 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
TMEM87A-202ENST00000389834 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
TMEM87A-202ENST00000389834 EEA1Q15075 1411 aa12.83□□□□□ -0.36
TMEM87A-202ENST00000389834 MIER1Q8N108 512 aa12.83□□□□□ -0.36
TMEM87A-202ENST00000389834 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
TMEM87A-202ENST00000389834 CLIP1P30622 1438 aa12.79□□□□□ -0.36
TMEM87A-202ENST00000389834 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
TMEM87A-202ENST00000389834 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
TMEM87A-202ENST00000389834 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
TMEM87A-202ENST00000389834 KIF21BO75037 1637 aa12.72□□□□□ -0.37
TMEM87A-202ENST00000389834 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
TMEM87A-202ENST00000389834 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
TMEM87A-202ENST00000389834 APLP2Q06481 763 aa12.68□□□□□ -0.38
TMEM87A-202ENST00000389834 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
TMEM87A-202ENST00000389834 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
TMEM87A-202ENST00000389834 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
TMEM87A-202ENST00000389834 KANK4Q5T7N3 995 aaPredicted RBP12.66□□□□□ -0.38
TMEM87A-202ENST00000389834 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
TMEM87A-202ENST00000389834 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
TMEM87A-202ENST00000389834 ITGAEP38570 1179 aa12.57□□□□□ -0.4
TMEM87A-202ENST00000389834 TOP2BQ02880 1626 aa12.57□□□□□ -0.4
TMEM87A-202ENST00000389834 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
TMEM87A-202ENST00000389834 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
TMEM87A-202ENST00000389834 CUX1P39880 1505 aa12.5□□□□□ -0.41
TMEM87A-202ENST00000389834 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
TMEM87A-202ENST00000389834 BIVM-ERCC5R4GMW8 1640 aa12.49□□□□□ -0.41
TMEM87A-202ENST00000389834 SUPT16HQ9Y5B9 1047 aaKnown RBP12.48□□□□□ -0.41
TMEM87A-202ENST00000389834 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
TMEM87A-202ENST00000389834 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
TMEM87A-202ENST00000389834 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
TMEM87A-202ENST00000389834 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
TMEM87A-202ENST00000389834 KIF27Q86VH2 1401 aa12.41□□□□□ -0.42
TMEM87A-202ENST00000389834 CLSPNQ9HAW4 1339 aa12.41□□□□□ -0.42
TMEM87A-202ENST00000389834 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
TMEM87A-202ENST00000389834 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
TMEM87A-202ENST00000389834 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
TMEM87A-202ENST00000389834 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
TMEM87A-202ENST00000389834 MAPKBP1O60336 1514 aa12.36□□□□□ -0.43
TMEM87A-202ENST00000389834 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
TMEM87A-202ENST00000389834 CUX2O14529 1486 aa12.34□□□□□ -0.43
TMEM87A-202ENST00000389834 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
TMEM87A-202ENST00000389834 BCANQ96GW7 911 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms