RNA–Protein interactions for RNA: ENST00000389022.8
Retrieved 6 of 6 RNA–protein pairs in 3.2 ms
NT5M-201, Transcript of 5',3'-nucleotidase, mitochondrial, human
APPRIS P1 TSL 1 (best) BASIC
Gene NT5M, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
NT5M-201 | ENST00000389022 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 31.14 | ■■■□□ 2.58 | 2e-8 | ■■■■■ 131.8 |
NT5M-201 | ENST00000389022 | FMR1 | Q06787 | 632 aa | Known RBP eCLIP | 34.41 | ■■■■□ 3.1 | 3e-15 | ■■■■■ 53.5 |
NT5M-201 | ENST00000389022 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 30.77 | ■■■□□ 2.52 | 2e-7 | ■■■■■ 44.8 |
NT5M-201 | ENST00000389022 | SF3B4 | Q15427 | 424 aa | Known RBP eCLIP | 25.72 | ■■□□□ 1.71 | 3e-6 | ■■■■■ 28.8 |
NT5M-201 | ENST00000389022 | GEMIN5 | Q8TEQ6 | 1508 aa | Known RBP eCLIP | 44.47 | ■■■■■ 4.71 | 2e-7 | ■■■■□ 25.8 |
NT5M-201 | ENST00000389022 | UPF1 | Q92900 | 1129 aa | Known RBP eCLIP | 38.19 | ■■■■□ 3.7 | 4e-7 | ■■■□□ 15.7 |