RNA–Protein interactions for RNA: ENST00000384776.1

RNU6-9-201, Transcript of RNA, U6 small nuclear 9, humanhuman

BASIC

Gene RNU6-9, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-9-201ENST00000384776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.31e-323■■■□□ 16.3
RNU6-9-201ENST00000384776 GPKOWQ92917 476 aaPredicted RBP eCLIP5.7□□□□□ -1.51e-323■■■■■ 42.3
RNU6-9-201ENST00000384776 SMNDC1O75940 238 aaKnown RBP eCLIP4.85□□□□□ -1.631e-323■■■■■ 3784.5
RNU6-9-201ENST00000384776 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.41□□□□□ -1.71e-323■■■■■ 163.4
RNU6-9-201ENST00000384776 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.1□□□□□ -1.751e-323■□□□□ 9.1
RNU6-9-201ENST00000384776 SF3A3Q12874 501 aaKnown RBP eCLIP3.14□□□□□ -1.911e-323■■■■■ 107.3
RNU6-9-201ENST00000384776 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.04□□□□□ -1.921e-323■■■■■ 100.4
RNU6-9-201ENST00000384776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.93□□□□□ -1.941e-323■■■■□ 21.7
RNU6-9-201ENST00000384776 AQRO60306 1485 aaKnown RBP eCLIP2.71□□□□□ -1.971e-323■■■■■ 98.9
RNU6-9-201ENST00000384776 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.79□□□□□ -2.121e-323■■■■■ 628
RNU6-9-201ENST00000384776 CDC40O60508 579 aaKnown RBP eCLIP1.49□□□□□ -2.171e-323■■■□□ 16.7
RNU6-9-201ENST00000384776 RBM22Q9NW64 420 aaKnown RBP eCLIP1.2□□□□□ -2.221e-323■■■■■ 91.2
RNU6-9-201ENST00000384776 QKIQ96PU8 341 aaKnown RBP eCLIP1.14□□□□□ -2.231e-323■■■■■ 444.1
RNU6-9-201ENST00000384776 EFTUD2Q15029 972 aaKnown RBP eCLIP2.41□□□□□ -2.023e-175■■■■■ 568
RNU6-9-201ENST00000384776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.72□□□□□ -1.977e-78■■■■■ 68.3
RNU6-9-201ENST00000384776 ZRANB2O95218 330 aaKnown RBP eCLIP3.62□□□□□ -1.839e-75■■■■■ 30
RNU6-9-201ENST00000384776 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.79□□□□□ -1.646e-65■■■□□ 16
RNU6-9-201ENST00000384776 ZC3H11AO75152 810 aaKnown RBP eCLIP3.03□□□□□ -1.924e-62■□□□□ 9.2
RNU6-9-201ENST00000384776 AGGF1Q8N302 714 aaeCLIP4.59□□□□□ -1.674e-57■■□□□ 11.5
RNU6-9-201ENST00000384776 PPIGQ13427 754 aaKnown RBP eCLIP2.53□□□□□ -27e-54■■■■■ 29.7
RNU6-9-201ENST00000384776 NOLC1Q14978 699 aaKnown RBP eCLIP3.8□□□□□ -1.89e-53■■■■■ 31.2
RNU6-9-201ENST00000384776 NCBP2P52298 156 aaKnown RBP eCLIP1.58□□□□□ -2.164e-51■■■■■ 55.3
RNU6-9-201ENST00000384776 U2AF2P26368 475 aaKnown RBP eCLIP1.44□□□□□ -2.189e-50■□□□□ 9.3
RNU6-9-201ENST00000384776 GTF2F1P35269 517 aaKnown RBP eCLIP4.32□□□□□ -1.722e-49■■■□□ 16.9
RNU6-9-201ENST00000384776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.35□□□□□ -0.912e-49■■■□□ 15.2
RNU6-9-201ENST00000384776 RBM15Q96T37 977 aaKnown RBP eCLIP3.7□□□□□ -1.829e-49■■■□□ 15.6
RNU6-9-201ENST00000384776 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.05□□□□□ -1.923e-47■■■■□ 21
RNU6-9-201ENST00000384776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.46□□□□□ -1.383e-45■□□□□ 11.2
RNU6-9-201ENST00000384776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.07□□□□□ -2.248e-44■■■□□ 19.2
RNU6-9-201ENST00000384776 HLTFQ14527 1009 aaKnown RBP eCLIP3.55□□□□□ -1.841e-42■□□□□ 9.6
RNU6-9-201ENST00000384776 EIF3DO15371 548 aaKnown RBP eCLIP2.66□□□□□ -1.982e-41■■■■□ 23.8
RNU6-9-201ENST00000384776 AARSP49588 968 aaKnown RBP eCLIP3.12□□□□□ -1.914e-34■■■■■ 138.7
RNU6-9-201ENST00000384776 NIPBLQ6KC79 2804 aaeCLIP1.9□□□□□ -2.116e-34■■■■□ 25.7
RNU6-9-201ENST00000384776 SF3B1O75533 1304 aaKnown RBP eCLIP1.85□□□□□ -2.118e-34■■■■■ 40.8
RNU6-9-201ENST00000384776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.66□□□□□ -1.824e-30■□□□□ 10.6
RNU6-9-201ENST00000384776 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.64□□□□□ -2.155e-30■■■■■ 31.9
RNU6-9-201ENST00000384776 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.21□□□□□ -2.061e-25■■■■■ 27.5
RNU6-9-201ENST00000384776 SF3B4Q15427 424 aaKnown RBP eCLIP2.77□□□□□ -1.974e-25■■■■□ 19.6
RNU6-9-201ENST00000384776 NPM1P06748 294 aaKnown RBP eCLIP7.57□□□□□ -1.21e-20■□□□□ 8.1
RNU6-9-201ENST00000384776 TRA2AQ13595 282 aaKnown RBP eCLIP2.35□□□□□ -2.039e-20■■■■□ 23.9
RNU6-9-201ENST00000384776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.58□□□□□ -24e-19■■■■■ 35.5
RNU6-9-201ENST00000384776 PTBP1P26599 531 aaKnown RBP eCLIP1.94□□□□□ -2.16e-18■■■□□ 15.8
RNU6-9-201ENST00000384776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.04□□□□□ -2.081e-17■■■□□ 16.8
RNU6-9-201ENST00000384776 RPS11P62280 158 aaKnown RBP eCLIP1.35□□□□□ -2.192e-16■■■■■ 31.9
RNU6-9-201ENST00000384776 LSM11P83369 360 aaKnown RBP eCLIP6.46□□□□□ -1.385e-15■■■■■ 53.2
RNU6-9-201ENST00000384776 YWHAGP61981 247 aaKnown RBP eCLIP1.55□□□□□ -2.165e-14■□□□□ 8.4
RNU6-9-201ENST00000384776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.04□□□□□ -1.923e-13■□□□□ 8.5
RNU6-9-201ENST00000384776 PUS1Q9Y606 427 aaKnown RBP eCLIP0.88□□□□□ -2.274e-13■■■□□ 14.7
RNU6-9-201ENST00000384776 IGF2BP3O00425 579 aaKnown RBP eCLIP4.44□□□□□ -1.72e-12■■□□□ 12.3
RNU6-9-201ENST00000384776 XRCC6P12956 609 aaKnown RBP eCLIP3.46□□□□□ -1.863e-12■□□□□ 10.7
RNU6-9-201ENST00000384776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.24□□□□□ -1.574e-12■■■□□ 15.4
RNU6-9-201ENST00000384776 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.87□□□□□ -2.276e-12■■□□□ 11.9
RNU6-9-201ENST00000384776 SRSF1Q07955 248 aaKnown RBP eCLIP3.05□□□□□ -1.924e-10■□□□□ 9
RNU6-9-201ENST00000384776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.14□□□□□ -2.073e-9■□□□□ 10.1
RNU6-9-201ENST00000384776 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.37□□□□□ -1.874e-9■■■■□ 21.2
RNU6-9-201ENST00000384776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.49□□□□□ -1.852e-8■■□□□ 13.8
RNU6-9-201ENST00000384776 PRPF4O43172 522 aaKnown RBP eCLIP3.1□□□□□ -1.912e-8■■■□□ 15.8
RNU6-9-201ENST00000384776 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.51□□□□□ -1.696e-8■□□□□ 8.6
RNU6-9-201ENST00000384776 AATFQ9NY61 560 aaKnown RBP eCLIP1.79□□□□□ -2.122e-7■□□□□ 9.8
RNU6-9-201ENST00000384776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.25□□□□□ -1.571e-6■■■□□ 19.1
RNU6-9-201ENST00000384776 EIF3GO75821 320 aaKnown RBP eCLIP1.62□□□□□ -2.156e-6■■■■□ 23.4
RNU6-9-201ENST00000384776 PCBP1Q15365 356 aaKnown RBP eCLIP3.92□□□□□ -1.786e-6■■□□□ 13
Retrieved 62 of 62 RNA–protein pairs in 13.5 ms