RNA–Protein interactions for RNA: ENST00000382457.8

NCAPD2-202, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 5

Gene NCAPD2, Length 2,844 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-202ENST00000382457 DKC1O60832 514 aaKnown RBP eCLIP11.13□□□□□ -0.631e-323■■■■■ 203.1
NCAPD2-202ENST00000382457 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.341e-259■■■■■ 172.5
NCAPD2-202ENST00000382457 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.93□□□□□ -0.663e-34■■■■■ 85.1
NCAPD2-202ENST00000382457 SMNDC1O75940 238 aaKnown RBP eCLIP11.77□□□□□ -0.531e-36■■■■■ 77.7
NCAPD2-202ENST00000382457 SF3B1O75533 1304 aaKnown RBP eCLIP11.02□□□□□ -0.652e-6■■■■■ 62
NCAPD2-202ENST00000382457 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.124e-37■■■■■ 51.6
NCAPD2-202ENST00000382457 PTBP1P26599 531 aaKnown RBP eCLIP10.08□□□□□ -0.81e-68■■■■■ 51.4
NCAPD2-202ENST00000382457 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.45□□□□□ -1.062e-7■■■■■ 50.8
NCAPD2-202ENST00000382457 SF3A3Q12874 501 aaKnown RBP eCLIP11.63□□□□□ -0.553e-9■■■■■ 38.5
NCAPD2-202ENST00000382457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.563e-6■■■■■ 34.7
NCAPD2-202ENST00000382457 QKIQ96PU8 341 aaKnown RBP eCLIP10.78□□□□□ -0.683e-8■■■■■ 31
NCAPD2-202ENST00000382457 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.156e-7■■■■■ 27.8
NCAPD2-202ENST00000382457 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.11□□□□□ -0.792e-10■■■■□ 26.7
NCAPD2-202ENST00000382457 SF3B4Q15427 424 aaKnown RBP eCLIP11□□□□□ -0.656e-7■■■■□ 25.7
NCAPD2-202ENST00000382457 EFTUD2Q15029 972 aaKnown RBP eCLIP11.18□□□□□ -0.626e-7■■■■□ 25.3
NCAPD2-202ENST00000382457 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.691e-7■■■■□ 23.7
NCAPD2-202ENST00000382457 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.412e-14■■■■□ 21
NCAPD2-202ENST00000382457 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.75□□□□□ -0.538e-55■■■■□ 20.4
NCAPD2-202ENST00000382457 ILF3Q12906 894 aaKnown RBP eCLIP9.79□□□□□ -0.845e-6■■■■□ 19.8
NCAPD2-202ENST00000382457 RPS3P23396 243 aaKnown RBP eCLIP10.29□□□□□ -0.766e-8■■■■□ 19.7
NCAPD2-202ENST00000382457 AATFQ9NY61 560 aaKnown RBP eCLIP12.15□□□□□ -0.471e-323■■■■□ 19.5
NCAPD2-202ENST00000382457 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■■□□ 18.8
NCAPD2-202ENST00000382457 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.224e-33■■■□□ 18.2
NCAPD2-202ENST00000382457 FXR1P51114 621 aaKnown RBP eCLIP12.04□□□□□ -0.484e-6■■■□□ 17.9
NCAPD2-202ENST00000382457 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.466e-7■■■□□ 17.8
NCAPD2-202ENST00000382457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.62□□□□□ -0.554e-83■■■□□ 17.6
NCAPD2-202ENST00000382457 SSBP05455 408 aaKnown RBP eCLIP11.9□□□□□ -0.59e-10■■■□□ 17.5
NCAPD2-202ENST00000382457 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.489e-7■■■□□ 17.5
NCAPD2-202ENST00000382457 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.575e-7■■■□□ 16.4
NCAPD2-202ENST00000382457 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.27□□□□□ -0.616e-30■■■□□ 16.2
NCAPD2-202ENST00000382457 BCCIPQ9P287 314 aaKnown RBP eCLIP12.85□□□□□ -0.351e-323■■■□□ 16
NCAPD2-202ENST00000382457 RBM22Q9NW64 420 aaKnown RBP eCLIP10.46□□□□□ -0.734e-42■■■□□ 15.5
NCAPD2-202ENST00000382457 SUB1P53999 127 aaKnown RBP eCLIP8.46□□□□□ -1.054e-6■■■□□ 15.2
NCAPD2-202ENST00000382457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■□□ 15.1
NCAPD2-202ENST00000382457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.81□□□□□ -0.368e-7■■□□□ 13.8
NCAPD2-202ENST00000382457 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.16□□□□□ -0.623e-29■■□□□ 13.6
NCAPD2-202ENST00000382457 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.88□□□□□ -0.679e-40■■□□□ 13.1
NCAPD2-202ENST00000382457 AGGF1Q8N302 714 aaeCLIP11.38□□□□□ -0.593e-51■■□□□ 13.1
NCAPD2-202ENST00000382457 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.59□□□□□ -0.558e-8■■□□□ 12.9
NCAPD2-202ENST00000382457 LSM11P83369 360 aaKnown RBP eCLIP10.03□□□□□ -0.85e-53■■□□□ 12.9
NCAPD2-202ENST00000382457 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.483e-56■■□□□ 12.7
NCAPD2-202ENST00000382457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.038e-7■■□□□ 12.6
NCAPD2-202ENST00000382457 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■□□□ 11.9
NCAPD2-202ENST00000382457 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■□□□ 11.8
NCAPD2-202ENST00000382457 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.332e-7■□□□□ 11.2
NCAPD2-202ENST00000382457 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.376e-8■□□□□ 11.1
NCAPD2-202ENST00000382457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.692e-10■□□□□ 10.8
NCAPD2-202ENST00000382457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.93□□□□□ -0.026e-55■□□□□ 10.7
NCAPD2-202ENST00000382457 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.966e-45■□□□□ 10.7
NCAPD2-202ENST00000382457 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.237e-11■□□□□ 10.7
NCAPD2-202ENST00000382457 SAFBQ15424 915 aaKnown RBP eCLIP11.95□□□□□ -0.56e-6■□□□□ 10.6
NCAPD2-202ENST00000382457 TROVE2P10155 538 aaKnown RBP eCLIP11.26□□□□□ -0.612e-51■□□□□ 10.4
NCAPD2-202ENST00000382457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.425e-7■□□□□ 10.4
NCAPD2-202ENST00000382457 EIF3HO15372 352 aaKnown RBP eCLIP11.95□□□□□ -0.53e-6■□□□□ 10.2
NCAPD2-202ENST00000382457 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.59□□□□□ -0.393e-15■□□□□ 10.1
NCAPD2-202ENST00000382457 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.542e-8■□□□□ 10.1
NCAPD2-202ENST00000382457 EIF4G2P78344 907 aaKnown RBP eCLIP14.46□□□□□ -0.091e-11■□□□□ 10
NCAPD2-202ENST00000382457 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.511e-32■□□□□ 9.5
NCAPD2-202ENST00000382457 HNRNPLP14866 589 aaKnown RBP eCLIP10.71□□□□□ -0.71e-6■□□□□ 9.1
NCAPD2-202ENST00000382457 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.24□□□□□ -0.773e-6■□□□□ 9.1
NCAPD2-202ENST00000382457 DDX3XO00571 662 aaKnown RBP eCLIP11.48□□□□□ -0.571e-10■□□□□ 9
NCAPD2-202ENST00000382457 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.371e-26■□□□□ 8.5
NCAPD2-202ENST00000382457 SLBPQ14493 270 aaKnown RBP eCLIP9.96□□□□□ -0.825e-10■□□□□ 8.4
Retrieved 63 of 63 RNA–protein pairs in 9.4 ms