RNA–Protein interactions for RNA: ENST00000382321.5

PMS2-203, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS2, Length 1,386 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-203ENST00000382321 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
PMS2-203ENST00000382321 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
PMS2-203ENST00000382321 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
PMS2-203ENST00000382321 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
PMS2-203ENST00000382321 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
PMS2-203ENST00000382321 ABCC9O60706 1549 aa15.18■□□□□ 0.02
PMS2-203ENST00000382321 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
PMS2-203ENST00000382321 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
PMS2-203ENST00000382321 FOXD1Q16676 465 aa14.54□□□□□ -0.08
PMS2-203ENST00000382321 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
PMS2-203ENST00000382321 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
PMS2-203ENST00000382321 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
PMS2-203ENST00000382321 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
PMS2-203ENST00000382321 NACADO15069 1562 aa13.98□□□□□ -0.17
PMS2-203ENST00000382321 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
PMS2-203ENST00000382321 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
PMS2-203ENST00000382321 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
PMS2-203ENST00000382321 ADRA2BP18089 450 aa13.73□□□□□ -0.21
PMS2-203ENST00000382321 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
PMS2-203ENST00000382321 UNC13AQ9UPW8 1703 aa13.71□□□□□ -0.21
PMS2-203ENST00000382321 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
PMS2-203ENST00000382321 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
PMS2-203ENST00000382321 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
PMS2-203ENST00000382321 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
PMS2-203ENST00000382321 MSH5O43196 834 aa13.53□□□□□ -0.24
PMS2-203ENST00000382321 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
PMS2-203ENST00000382321 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
PMS2-203ENST00000382321 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
PMS2-203ENST00000382321 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
PMS2-203ENST00000382321 CUX2O14529 1486 aa13.23□□□□□ -0.29
PMS2-203ENST00000382321 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
PMS2-203ENST00000382321 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
PMS2-203ENST00000382321 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
PMS2-203ENST00000382321 NESP48681 1621 aa12.88□□□□□ -0.35
PMS2-203ENST00000382321 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
PMS2-203ENST00000382321 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
PMS2-203ENST00000382321 SMARCA2P51531 1590 aa12.76□□□□□ -0.37
PMS2-203ENST00000382321 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
PMS2-203ENST00000382321 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
PMS2-203ENST00000382321 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
PMS2-203ENST00000382321 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
PMS2-203ENST00000382321 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
PMS2-203ENST00000382321 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
PMS2-203ENST00000382321 SMARCA4P51532 1647 aa12.65□□□□□ -0.38
PMS2-203ENST00000382321 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
PMS2-203ENST00000382321 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
PMS2-203ENST00000382321 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.39
PMS2-203ENST00000382321 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
PMS2-203ENST00000382321 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
PMS2-203ENST00000382321 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
PMS2-203ENST00000382321 WDR62O43379 1518 aa12.51□□□□□ -0.41
PMS2-203ENST00000382321 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
PMS2-203ENST00000382321 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
PMS2-203ENST00000382321 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
PMS2-203ENST00000382321 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.42
PMS2-203ENST00000382321 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
PMS2-203ENST00000382321 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
PMS2-203ENST00000382321 CYB5RLQ6IPT4 315 aa12.42□□□□□ -0.42
PMS2-203ENST00000382321 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.42
PMS2-203ENST00000382321 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
PMS2-203ENST00000382321 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
PMS2-203ENST00000382321 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
PMS2-203ENST00000382321 ARHGEF11O15085 1522 aa12.35□□□□□ -0.43
PMS2-203ENST00000382321 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
PMS2-203ENST00000382321 CFTRP13569 1480 aa12.28□□□□□ -0.44
PMS2-203ENST00000382321 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
PMS2-203ENST00000382321 FBLN2P98095 1184 aa12.23□□□□□ -0.45
PMS2-203ENST00000382321 WIZO95785 1651 aa12.23□□□□□ -0.45
PMS2-203ENST00000382321 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
PMS2-203ENST00000382321 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
PMS2-203ENST00000382321 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
PMS2-203ENST00000382321 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.47
PMS2-203ENST00000382321 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.471e-7■■■■□ 21.1
PMS2-203ENST00000382321 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
PMS2-203ENST00000382321 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
PMS2-203ENST00000382321 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
PMS2-203ENST00000382321 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
PMS2-203ENST00000382321 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
PMS2-203ENST00000382321 ABCC8Q09428 1581 aa12.06□□□□□ -0.48
PMS2-203ENST00000382321 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
PMS2-203ENST00000382321 CHD1O14646 1710 aa12.04□□□□□ -0.48
PMS2-203ENST00000382321 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
PMS2-203ENST00000382321 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
PMS2-203ENST00000382321 DNMBPQ6XZF7 1577 aa11.98□□□□□ -0.49
PMS2-203ENST00000382321 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
PMS2-203ENST00000382321 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
PMS2-203ENST00000382321 TARBP1Q13395 1621 aaKnown RBP11.95□□□□□ -0.5
PMS2-203ENST00000382321 POLA1P09884 1462 aaPredicted RBP11.94□□□□□ -0.5
PMS2-203ENST00000382321 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
PMS2-203ENST00000382321 SOGA1O94964 1423 aa11.94□□□□□ -0.5
PMS2-203ENST00000382321 SYNJ1O43426 1573 aa11.94□□□□□ -0.5
PMS2-203ENST00000382321 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
PMS2-203ENST00000382321 CLASP1Q7Z460 1538 aa11.93□□□□□ -0.5
PMS2-203ENST00000382321 GAPVD1Q14C86 1478 aa11.93□□□□□ -0.5
PMS2-203ENST00000382321 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
PMS2-203ENST00000382321 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
PMS2-203ENST00000382321 MAGI1Q96QZ7 1491 aaPredicted RBP11.88□□□□□ -0.51
PMS2-203ENST00000382321 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
PMS2-203ENST00000382321 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
PMS2-203ENST00000382321 GRIN2BQ13224 1484 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms