RNA–Protein interactions for RNA: ENST00000381898.5

PSMF1-204, Transcript of proteasome inhibitor subunit 1, humanhuman

TSL 3

Gene PSMF1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-204ENST00000381898 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.03
PSMF1-204ENST00000381898 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
PSMF1-204ENST00000381898 ABCC9O60706 1549 aa28.8■■■□□ 2.2
PSMF1-204ENST00000381898 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
PSMF1-204ENST00000381898 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
PSMF1-204ENST00000381898 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.08
PSMF1-204ENST00000381898 NACADO15069 1562 aa27.99■■■□□ 2.07
PSMF1-204ENST00000381898 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
PSMF1-204ENST00000381898 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
PSMF1-204ENST00000381898 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
PSMF1-204ENST00000381898 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
PSMF1-204ENST00000381898 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
PSMF1-204ENST00000381898 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
PSMF1-204ENST00000381898 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
PSMF1-204ENST00000381898 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
PSMF1-204ENST00000381898 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
PSMF1-204ENST00000381898 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
PSMF1-204ENST00000381898 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
PSMF1-204ENST00000381898 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
PSMF1-204ENST00000381898 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
PSMF1-204ENST00000381898 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
PSMF1-204ENST00000381898 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
PSMF1-204ENST00000381898 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
PSMF1-204ENST00000381898 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
PSMF1-204ENST00000381898 WIZO95785 1651 aa25.93■■□□□ 1.74
PSMF1-204ENST00000381898 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
PSMF1-204ENST00000381898 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
PSMF1-204ENST00000381898 NCAPD3P42695 1498 aa25.83■■□□□ 1.73
PSMF1-204ENST00000381898 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
PSMF1-204ENST00000381898 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
PSMF1-204ENST00000381898 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
PSMF1-204ENST00000381898 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
PSMF1-204ENST00000381898 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
PSMF1-204ENST00000381898 CFTRP13569 1480 aa25.09■■□□□ 1.61
PSMF1-204ENST00000381898 NESP48681 1621 aa25.08■■□□□ 1.6
PSMF1-204ENST00000381898 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
PSMF1-204ENST00000381898 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
PSMF1-204ENST00000381898 PRDM2Q13029 1718 aa24.89■■□□□ 1.58
PSMF1-204ENST00000381898 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
PSMF1-204ENST00000381898 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
PSMF1-204ENST00000381898 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
PSMF1-204ENST00000381898 KIF21AQ7Z4S6 1674 aa24.76■■□□□ 1.55
PSMF1-204ENST00000381898 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
PSMF1-204ENST00000381898 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
PSMF1-204ENST00000381898 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
PSMF1-204ENST00000381898 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
PSMF1-204ENST00000381898 CUX1P39880 1505 aa24.55■■□□□ 1.52
PSMF1-204ENST00000381898 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
PSMF1-204ENST00000381898 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
PSMF1-204ENST00000381898 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
PSMF1-204ENST00000381898 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
PSMF1-204ENST00000381898 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
PSMF1-204ENST00000381898 WDR62O43379 1518 aa24.49■■□□□ 1.51
PSMF1-204ENST00000381898 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
PSMF1-204ENST00000381898 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
PSMF1-204ENST00000381898 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
PSMF1-204ENST00000381898 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
PSMF1-204ENST00000381898 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
PSMF1-204ENST00000381898 CUX2O14529 1486 aa24.32■■□□□ 1.48
PSMF1-204ENST00000381898 SOGA1O94964 1423 aa24.27■■□□□ 1.48
PSMF1-204ENST00000381898 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
PSMF1-204ENST00000381898 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
PSMF1-204ENST00000381898 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
PSMF1-204ENST00000381898 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
PSMF1-204ENST00000381898 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
PSMF1-204ENST00000381898 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
PSMF1-204ENST00000381898 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
PSMF1-204ENST00000381898 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
PSMF1-204ENST00000381898 KIF27Q86VH2 1401 aa24.04■■□□□ 1.44
PSMF1-204ENST00000381898 AQRO60306 1485 aaKnown RBP eCLIP24.02■■□□□ 1.44
PSMF1-204ENST00000381898 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
PSMF1-204ENST00000381898 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
PSMF1-204ENST00000381898 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
PSMF1-204ENST00000381898 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
PSMF1-204ENST00000381898 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
PSMF1-204ENST00000381898 EEA1Q15075 1411 aa23.94■■□□□ 1.42
PSMF1-204ENST00000381898 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
PSMF1-204ENST00000381898 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
PSMF1-204ENST00000381898 PBRM1Q86U86 1689 aa23.88■■□□□ 1.41
PSMF1-204ENST00000381898 IGF1RP08069 1367 aa23.87■■□□□ 1.41
PSMF1-204ENST00000381898 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
PSMF1-204ENST00000381898 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
PSMF1-204ENST00000381898 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
PSMF1-204ENST00000381898 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
PSMF1-204ENST00000381898 CUL7Q14999 1698 aa23.75■■□□□ 1.39
PSMF1-204ENST00000381898 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
PSMF1-204ENST00000381898 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
PSMF1-204ENST00000381898 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
PSMF1-204ENST00000381898 PRXQ9BXM0 1461 aa23.7■■□□□ 1.38
PSMF1-204ENST00000381898 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
PSMF1-204ENST00000381898 FBLN2P98095 1184 aa23.67■■□□□ 1.38
PSMF1-204ENST00000381898 CHMP7Q8WUX9 453 aaPredicted RBP23.67■■□□□ 1.38
PSMF1-204ENST00000381898 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
PSMF1-204ENST00000381898 EHMT2Q96KQ7 1210 aa23.65■■□□□ 1.38
PSMF1-204ENST00000381898 KIF21BO75037 1637 aa23.64■■□□□ 1.38
PSMF1-204ENST00000381898 GRIN2AQ12879 1464 aa23.59■■□□□ 1.37
PSMF1-204ENST00000381898 GOLGA3Q08378 1498 aa23.58■■□□□ 1.37
PSMF1-204ENST00000381898 CHD1O14646 1710 aa23.56■■□□□ 1.36
PSMF1-204ENST00000381898 LOC105371045A0A1W2PR82 267 aa23.52■■□□□ 1.36
PSMF1-204ENST00000381898 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms