RNA–Protein interactions for RNA: ENST00000381747.7

NUP58-203, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-203ENST00000381747 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
NUP58-203ENST00000381747 CCDC180Q9P1Z9 1646 aa37.96■■■■□ 3.67
NUP58-203ENST00000381747 ZCCHC6Q5VYS8 1495 aaKnown RBP36.41■■■■□ 3.42
NUP58-203ENST00000381747 ABCC9O60706 1549 aa36.12■■■■□ 3.37
NUP58-203ENST00000381747 DCAF8L2P0C7V8 631 aa35.97■■■■□ 3.35
NUP58-203ENST00000381747 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
NUP58-203ENST00000381747 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
NUP58-203ENST00000381747 NACADO15069 1562 aa35.38■■■■□ 3.25
NUP58-203ENST00000381747 SHROOM4Q9ULL8 1493 aa35.33■■■■□ 3.25
NUP58-203ENST00000381747 RB1CC1Q8TDY2 1594 aa35.15■■■■□ 3.22
NUP58-203ENST00000381747 SCRIBQ14160 1630 aa34.93■■■■□ 3.18
NUP58-203ENST00000381747 UNC13AQ9UPW8 1703 aa34.49■■■■□ 3.11
NUP58-203ENST00000381747 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
NUP58-203ENST00000381747 PABPN1Q86U42 306 aaKnown RBP eCLIP34.01■■■■□ 3.04
NUP58-203ENST00000381747 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
NUP58-203ENST00000381747 CECR2Q9BXF3 1484 aa33.76■■■■□ 3
NUP58-203ENST00000381747 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
NUP58-203ENST00000381747 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
NUP58-203ENST00000381747 BAZ1AQ9NRL2 1556 aaPredicted RBP33.53■■■□□ 2.96
NUP58-203ENST00000381747 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
NUP58-203ENST00000381747 WIZO95785 1651 aa33.29■■■□□ 2.92
NUP58-203ENST00000381747 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
NUP58-203ENST00000381747 PEG3Q9GZU2 1588 aa32.99■■■□□ 2.87
NUP58-203ENST00000381747 TOP2AP11388 1531 aaKnown RBP32.91■■■□□ 2.86
NUP58-203ENST00000381747 ATAD2BQ9ULI0 1458 aa32.91■■■□□ 2.86
NUP58-203ENST00000381747 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
NUP58-203ENST00000381747 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
NUP58-203ENST00000381747 CC2D2AQ9P2K1 1620 aa32.68■■■□□ 2.82
NUP58-203ENST00000381747 NCAPD3P42695 1498 aa32.63■■■□□ 2.81
NUP58-203ENST00000381747 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
NUP58-203ENST00000381747 CCDC88BA6NC98 1476 aa32.56■■■□□ 2.8
NUP58-203ENST00000381747 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
NUP58-203ENST00000381747 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
NUP58-203ENST00000381747 CFTRP13569 1480 aa31.86■■■□□ 2.69
NUP58-203ENST00000381747 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
NUP58-203ENST00000381747 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
NUP58-203ENST00000381747 CADPSQ9ULU8 1353 aa31.8■■■□□ 2.68
NUP58-203ENST00000381747 PRDM2Q13029 1718 aa31.77■■■□□ 2.68
NUP58-203ENST00000381747 NESP48681 1621 aa31.64■■■□□ 2.66
NUP58-203ENST00000381747 WRNQ14191 1432 aaPredicted RBP eCLIP31.63■■■□□ 2.65
NUP58-203ENST00000381747 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
NUP58-203ENST00000381747 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
NUP58-203ENST00000381747 FANCD2Q9BXW9 1451 aa31.48■■■□□ 2.63
NUP58-203ENST00000381747 TOP2BQ02880 1626 aa31.4■■■□□ 2.62
NUP58-203ENST00000381747 BIVM-ERCC5R4GMW8 1640 aa31.39■■■□□ 2.62
NUP58-203ENST00000381747 CUX1P39880 1505 aa31.38■■■□□ 2.61
NUP58-203ENST00000381747 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
NUP58-203ENST00000381747 CEP164Q9UPV0 1460 aa31.31■■■□□ 2.6
NUP58-203ENST00000381747 FAM9AQ8IZU1 332 aaPredicted RBP31.29■■■□□ 2.6
NUP58-203ENST00000381747 KIF21AQ7Z4S6 1674 aa31.28■■■□□ 2.6
NUP58-203ENST00000381747 SOGA1O94964 1423 aa31.18■■■□□ 2.58
NUP58-203ENST00000381747 DNMBPQ6XZF7 1577 aa31.17■■■□□ 2.58
NUP58-203ENST00000381747 TOPBP1Q92547 1522 aa31.12■■■□□ 2.57
NUP58-203ENST00000381747 URB2Q14146 1524 aaKnown RBP31.1■■■□□ 2.57
NUP58-203ENST00000381747 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
NUP58-203ENST00000381747 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
NUP58-203ENST00000381747 LOC105371045A0A1W2PR82 267 aa31.05■■■□□ 2.56
NUP58-203ENST00000381747 EEA1Q15075 1411 aa31.04■■■□□ 2.56
NUP58-203ENST00000381747 ERCC6Q03468 1493 aa30.99■■■□□ 2.55
NUP58-203ENST00000381747 MRC2Q9UBG0 1479 aa30.98■■■□□ 2.55
NUP58-203ENST00000381747 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
NUP58-203ENST00000381747 CSRNP3Q8WYN3 585 aa30.9■■■□□ 2.54
NUP58-203ENST00000381747 EHMT2Q96KQ7 1210 aa30.9■■■□□ 2.54
NUP58-203ENST00000381747 RAD54L2Q9Y4B4 1467 aa30.86■■■□□ 2.53
NUP58-203ENST00000381747 KIF27Q86VH2 1401 aa30.85■■■□□ 2.53
NUP58-203ENST00000381747 CUX2O14529 1486 aa30.84■■■□□ 2.53
NUP58-203ENST00000381747 WDR62O43379 1518 aa30.81■■■□□ 2.52
NUP58-203ENST00000381747 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
NUP58-203ENST00000381747 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.52
NUP58-203ENST00000381747 WDR97A6NE52 1622 aa30.73■■■□□ 2.51
NUP58-203ENST00000381747 KIF21BO75037 1637 aa30.69■■■□□ 2.5
NUP58-203ENST00000381747 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
NUP58-203ENST00000381747 GOLGA3Q08378 1498 aa30.64■■■□□ 2.5
NUP58-203ENST00000381747 PRXQ9BXM0 1461 aa30.57■■■□□ 2.48
NUP58-203ENST00000381747 IGF1RP08069 1367 aa30.57■■■□□ 2.48
NUP58-203ENST00000381747 TDRD9Q8NDG6 1382 aaKnown RBP30.57■■■□□ 2.48
NUP58-203ENST00000381747 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
NUP58-203ENST00000381747 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
NUP58-203ENST00000381747 IFT140Q96RY7 1462 aa30.55■■■□□ 2.48
NUP58-203ENST00000381747 UBTFP17480 764 aaKnown RBP30.53■■■□□ 2.48
NUP58-203ENST00000381747 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
NUP58-203ENST00000381747 GAPVD1Q14C86 1478 aa30.5■■■□□ 2.47
NUP58-203ENST00000381747 TNIKQ9UKE5 1360 aa30.47■■■□□ 2.47
NUP58-203ENST00000381747 CARMIL1Q5VZK9 1371 aa30.43■■■□□ 2.46
NUP58-203ENST00000381747 ZNF608Q9ULD9 1512 aaPredicted RBP30.42■■■□□ 2.46
NUP58-203ENST00000381747 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.463e-7■■■□□ 19.2
NUP58-203ENST00000381747 CUL7Q14999 1698 aa30.41■■■□□ 2.46
NUP58-203ENST00000381747 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
NUP58-203ENST00000381747 EIF4G3O43432 1585 aaKnown RBP30.34■■■□□ 2.45
NUP58-203ENST00000381747 CEP162Q5TB80 1403 aa30.33■■■□□ 2.45
NUP58-203ENST00000381747 GRIN2BQ13224 1484 aa30.29■■■□□ 2.44
NUP58-203ENST00000381747 ADAMTS12P58397 1594 aa30.19■■■□□ 2.42
NUP58-203ENST00000381747 RANGAP1P46060 587 aaPredicted RBP30.16■■■□□ 2.42
NUP58-203ENST00000381747 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
NUP58-203ENST00000381747 SNAPC4Q5SXM2 1469 aa30.14■■■□□ 2.42
NUP58-203ENST00000381747 CLIP1P30622 1438 aa30.14■■■□□ 2.42
NUP58-203ENST00000381747 CTTNBP2Q8WZ74 1663 aa30.07■■■□□ 2.4
NUP58-203ENST00000381747 MAGI1Q96QZ7 1491 aaPredicted RBP30.05■■■□□ 2.4
NUP58-203ENST00000381747 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
NUP58-203ENST00000381747 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms