RNA–Protein interactions for RNA: ENST00000381709.6

GAGE1-202, Transcript of G antigen 1, humanhuman

TSL 2

Gene GAGE1, Length 3,129 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAGE1-202ENST00000381709 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
GAGE1-202ENST00000381709 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
GAGE1-202ENST00000381709 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
GAGE1-202ENST00000381709 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
GAGE1-202ENST00000381709 ABCC9O60706 1549 aa13.43□□□□□ -0.26
GAGE1-202ENST00000381709 SUPT5HO00267 1087 aaKnown RBP13.42□□□□□ -0.26
GAGE1-202ENST00000381709 ZCCHC6Q5VYS8 1495 aaKnown RBP13.34□□□□□ -0.27
GAGE1-202ENST00000381709 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
GAGE1-202ENST00000381709 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
GAGE1-202ENST00000381709 MYO15BQ96JP2 1530 aa12.9□□□□□ -0.34
GAGE1-202ENST00000381709 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
GAGE1-202ENST00000381709 NACADO15069 1562 aa12.77□□□□□ -0.36
GAGE1-202ENST00000381709 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
GAGE1-202ENST00000381709 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
GAGE1-202ENST00000381709 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
GAGE1-202ENST00000381709 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
GAGE1-202ENST00000381709 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
GAGE1-202ENST00000381709 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
GAGE1-202ENST00000381709 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
GAGE1-202ENST00000381709 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
GAGE1-202ENST00000381709 LOC105371045A0A1W2PR82 267 aa12.39□□□□□ -0.43
GAGE1-202ENST00000381709 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
GAGE1-202ENST00000381709 WIZO95785 1651 aa12.34□□□□□ -0.43
GAGE1-202ENST00000381709 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
GAGE1-202ENST00000381709 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.45
GAGE1-202ENST00000381709 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
GAGE1-202ENST00000381709 SMARCA4P51532 1647 aa12.18□□□□□ -0.46
GAGE1-202ENST00000381709 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
GAGE1-202ENST00000381709 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
GAGE1-202ENST00000381709 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
GAGE1-202ENST00000381709 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
GAGE1-202ENST00000381709 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
GAGE1-202ENST00000381709 PPARGC1BQ86YN6 1023 aaKnown RBP12.05□□□□□ -0.48
GAGE1-202ENST00000381709 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
GAGE1-202ENST00000381709 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
GAGE1-202ENST00000381709 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
GAGE1-202ENST00000381709 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
GAGE1-202ENST00000381709 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
GAGE1-202ENST00000381709 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
GAGE1-202ENST00000381709 PCGF6Q9BYE7 350 aa11.97□□□□□ -0.49
GAGE1-202ENST00000381709 SOGA1O94964 1423 aa11.9□□□□□ -0.5
GAGE1-202ENST00000381709 WRNQ14191 1432 aaPredicted RBP eCLIP11.87□□□□□ -0.51
GAGE1-202ENST00000381709 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
GAGE1-202ENST00000381709 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
GAGE1-202ENST00000381709 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
GAGE1-202ENST00000381709 CC2D2AQ9P2K1 1620 aa11.84□□□□□ -0.51
GAGE1-202ENST00000381709 PEG3Q9GZU2 1588 aa11.8□□□□□ -0.52
GAGE1-202ENST00000381709 NESP48681 1621 aa11.77□□□□□ -0.53
GAGE1-202ENST00000381709 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
GAGE1-202ENST00000381709 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
GAGE1-202ENST00000381709 SYNJ1O43426 1573 aa11.71□□□□□ -0.54
GAGE1-202ENST00000381709 CFTRP13569 1480 aa11.67□□□□□ -0.54
GAGE1-202ENST00000381709 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
GAGE1-202ENST00000381709 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
GAGE1-202ENST00000381709 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
GAGE1-202ENST00000381709 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
GAGE1-202ENST00000381709 CUX1P39880 1505 aa11.6□□□□□ -0.55
GAGE1-202ENST00000381709 CUX2O14529 1486 aa11.59□□□□□ -0.55
GAGE1-202ENST00000381709 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
GAGE1-202ENST00000381709 TDRD9Q8NDG6 1382 aaKnown RBP11.58□□□□□ -0.56
GAGE1-202ENST00000381709 APLP2Q06481 763 aa11.58□□□□□ -0.56
GAGE1-202ENST00000381709 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
GAGE1-202ENST00000381709 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
GAGE1-202ENST00000381709 KIF27Q86VH2 1401 aa11.54□□□□□ -0.56
GAGE1-202ENST00000381709 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
GAGE1-202ENST00000381709 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
GAGE1-202ENST00000381709 FBLN2P98095 1184 aa11.53□□□□□ -0.56
GAGE1-202ENST00000381709 EEA1Q15075 1411 aa11.52□□□□□ -0.56
GAGE1-202ENST00000381709 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.56
GAGE1-202ENST00000381709 CLIP1P30622 1438 aa11.5□□□□□ -0.57
GAGE1-202ENST00000381709 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
GAGE1-202ENST00000381709 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
GAGE1-202ENST00000381709 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
GAGE1-202ENST00000381709 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
GAGE1-202ENST00000381709 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
GAGE1-202ENST00000381709 IGF1RP08069 1367 aa11.47□□□□□ -0.57
GAGE1-202ENST00000381709 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
GAGE1-202ENST00000381709 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
GAGE1-202ENST00000381709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
GAGE1-202ENST00000381709 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.58
GAGE1-202ENST00000381709 ITGAEP38570 1179 aa11.46□□□□□ -0.58
GAGE1-202ENST00000381709 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
GAGE1-202ENST00000381709 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
GAGE1-202ENST00000381709 HRCP23327 699 aa11.42□□□□□ -0.58
GAGE1-202ENST00000381709 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
GAGE1-202ENST00000381709 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
GAGE1-202ENST00000381709 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
GAGE1-202ENST00000381709 CCER1Q8TC90 406 aaPredicted RBP11.38□□□□□ -0.59
GAGE1-202ENST00000381709 PRDM2Q13029 1718 aa11.38□□□□□ -0.59
GAGE1-202ENST00000381709 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
GAGE1-202ENST00000381709 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
GAGE1-202ENST00000381709 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
GAGE1-202ENST00000381709 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
GAGE1-202ENST00000381709 GAPVD1Q14C86 1478 aa11.31□□□□□ -0.6
GAGE1-202ENST00000381709 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
GAGE1-202ENST00000381709 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
GAGE1-202ENST00000381709 KIF21BO75037 1637 aa11.29□□□□□ -0.6
GAGE1-202ENST00000381709 VPS8Q8N3P4 1428 aa11.29□□□□□ -0.6
GAGE1-202ENST00000381709 ARAP1Q96P48 1450 aa11.29□□□□□ -0.6
GAGE1-202ENST00000381709 FHOD3Q2V2M9 1422 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms