RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
TTC39B-202ENST00000380850 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
TTC39B-202ENST00000380850 DCAF8L2P0C7V8 631 aa23.04■■□□□ 1.28
TTC39B-202ENST00000380850 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
TTC39B-202ENST00000380850 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
TTC39B-202ENST00000380850 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
TTC39B-202ENST00000380850 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
TTC39B-202ENST00000380850 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
TTC39B-202ENST00000380850 FAM9AQ8IZU1 332 aaPredicted RBP21.24■□□□□ 0.99
TTC39B-202ENST00000380850 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
TTC39B-202ENST00000380850 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
TTC39B-202ENST00000380850 ABCC9O60706 1549 aa21.07■□□□□ 0.96
TTC39B-202ENST00000380850 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
TTC39B-202ENST00000380850 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
TTC39B-202ENST00000380850 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
TTC39B-202ENST00000380850 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
TTC39B-202ENST00000380850 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
TTC39B-202ENST00000380850 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
TTC39B-202ENST00000380850 HRCP23327 699 aa20.42■□□□□ 0.86
TTC39B-202ENST00000380850 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
TTC39B-202ENST00000380850 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
TTC39B-202ENST00000380850 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
TTC39B-202ENST00000380850 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
TTC39B-202ENST00000380850 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
TTC39B-202ENST00000380850 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
TTC39B-202ENST00000380850 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
TTC39B-202ENST00000380850 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
TTC39B-202ENST00000380850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
TTC39B-202ENST00000380850 WIZO95785 1651 aa19.96■□□□□ 0.79
TTC39B-202ENST00000380850 NACADO15069 1562 aa19.81■□□□□ 0.76
TTC39B-202ENST00000380850 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
TTC39B-202ENST00000380850 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
TTC39B-202ENST00000380850 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
TTC39B-202ENST00000380850 SOGA1O94964 1423 aa19.65■□□□□ 0.74
TTC39B-202ENST00000380850 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
TTC39B-202ENST00000380850 RUSC2Q8N2Y8 1516 aa19.59■□□□□ 0.73
TTC39B-202ENST00000380850 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
TTC39B-202ENST00000380850 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
TTC39B-202ENST00000380850 ITGAEP38570 1179 aa19.45■□□□□ 0.7
TTC39B-202ENST00000380850 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
TTC39B-202ENST00000380850 APLP2Q06481 763 aa19.4■□□□□ 0.7
TTC39B-202ENST00000380850 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
TTC39B-202ENST00000380850 YTHDC1Q96MU7 727 aaKnown RBP19.35■□□□□ 0.69
TTC39B-202ENST00000380850 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
TTC39B-202ENST00000380850 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
TTC39B-202ENST00000380850 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
TTC39B-202ENST00000380850 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
TTC39B-202ENST00000380850 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
TTC39B-202ENST00000380850 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.68
TTC39B-202ENST00000380850 UNC13AQ9UPW8 1703 aa19.23■□□□□ 0.67
TTC39B-202ENST00000380850 BAZ1BQ9UIG0 1483 aaKnown RBP19.2■□□□□ 0.66
TTC39B-202ENST00000380850 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
TTC39B-202ENST00000380850 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
TTC39B-202ENST00000380850 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
TTC39B-202ENST00000380850 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
TTC39B-202ENST00000380850 CLIP1P30622 1438 aa19.06■□□□□ 0.64
TTC39B-202ENST00000380850 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
TTC39B-202ENST00000380850 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
TTC39B-202ENST00000380850 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
TTC39B-202ENST00000380850 SYNJ1O43426 1573 aa19■□□□□ 0.63
TTC39B-202ENST00000380850 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
TTC39B-202ENST00000380850 GOLGA3Q08378 1498 aa19■□□□□ 0.63
TTC39B-202ENST00000380850 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
TTC39B-202ENST00000380850 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
TTC39B-202ENST00000380850 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
TTC39B-202ENST00000380850 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.62
TTC39B-202ENST00000380850 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
TTC39B-202ENST00000380850 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
TTC39B-202ENST00000380850 MIER1Q8N108 512 aa18.81■□□□□ 0.6
TTC39B-202ENST00000380850 HIRIP3Q9BW71 556 aaPredicted RBP18.81■□□□□ 0.6
TTC39B-202ENST00000380850 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
TTC39B-202ENST00000380850 EEA1Q15075 1411 aa18.77■□□□□ 0.6
TTC39B-202ENST00000380850 CUX2O14529 1486 aa18.71■□□□□ 0.59
TTC39B-202ENST00000380850 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.58
TTC39B-202ENST00000380850 ACIN1Q9UKV3 1341 aaKnown RBP18.69■□□□□ 0.58
TTC39B-202ENST00000380850 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.58
TTC39B-202ENST00000380850 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
TTC39B-202ENST00000380850 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
TTC39B-202ENST00000380850 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
TTC39B-202ENST00000380850 NESP48681 1621 aa18.62■□□□□ 0.57
TTC39B-202ENST00000380850 CUX1P39880 1505 aa18.62■□□□□ 0.57
TTC39B-202ENST00000380850 KIF21BO75037 1637 aa18.6■□□□□ 0.57
TTC39B-202ENST00000380850 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
TTC39B-202ENST00000380850 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.56
TTC39B-202ENST00000380850 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
TTC39B-202ENST00000380850 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
TTC39B-202ENST00000380850 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
TTC39B-202ENST00000380850 FBLN2P98095 1184 aa18.53■□□□□ 0.56
TTC39B-202ENST00000380850 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
TTC39B-202ENST00000380850 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
TTC39B-202ENST00000380850 IGF1RP08069 1367 aa18.51■□□□□ 0.55
TTC39B-202ENST00000380850 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
TTC39B-202ENST00000380850 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
TTC39B-202ENST00000380850 FHOD3Q2V2M9 1422 aa18.48■□□□□ 0.55
TTC39B-202ENST00000380850 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
TTC39B-202ENST00000380850 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
TTC39B-202ENST00000380850 CFTRP13569 1480 aa18.44■□□□□ 0.54
TTC39B-202ENST00000380850 DDX10Q13206 875 aaKnown RBP18.43■□□□□ 0.54
TTC39B-202ENST00000380850 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
TTC39B-202ENST00000380850 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms