RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
PMS2-202ENST00000380416 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
PMS2-202ENST00000380416 NISCHQ9Y2I1 1504 aa21.52■■□□□ 1.04
PMS2-202ENST00000380416 ABCC9O60706 1549 aa20.49■□□□□ 0.87
PMS2-202ENST00000380416 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
PMS2-202ENST00000380416 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
PMS2-202ENST00000380416 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
PMS2-202ENST00000380416 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
PMS2-202ENST00000380416 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
PMS2-202ENST00000380416 FOXD1Q16676 465 aa19.05■□□□□ 0.64
PMS2-202ENST00000380416 DNAJC5Q9H3Z4 198 aa18.99■□□□□ 0.63
PMS2-202ENST00000380416 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
PMS2-202ENST00000380416 NACADO15069 1562 aa18.85■□□□□ 0.61
PMS2-202ENST00000380416 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
PMS2-202ENST00000380416 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
PMS2-202ENST00000380416 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
PMS2-202ENST00000380416 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.56
PMS2-202ENST00000380416 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
PMS2-202ENST00000380416 SHROOM4Q9ULL8 1493 aa18.38■□□□□ 0.53
PMS2-202ENST00000380416 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
PMS2-202ENST00000380416 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
PMS2-202ENST00000380416 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
PMS2-202ENST00000380416 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
PMS2-202ENST00000380416 CUX2O14529 1486 aa18.08■□□□□ 0.49
PMS2-202ENST00000380416 MSH5O43196 834 aa18■□□□□ 0.47
PMS2-202ENST00000380416 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
PMS2-202ENST00000380416 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
PMS2-202ENST00000380416 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
PMS2-202ENST00000380416 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
PMS2-202ENST00000380416 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
PMS2-202ENST00000380416 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
PMS2-202ENST00000380416 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
PMS2-202ENST00000380416 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
PMS2-202ENST00000380416 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
PMS2-202ENST00000380416 NESP48681 1621 aa17.37■□□□□ 0.37
PMS2-202ENST00000380416 ADRA2BP18089 450 aa17.32■□□□□ 0.36
PMS2-202ENST00000380416 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
PMS2-202ENST00000380416 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
PMS2-202ENST00000380416 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
PMS2-202ENST00000380416 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
PMS2-202ENST00000380416 LAMC3Q9Y6N6 1575 aa17.16■□□□□ 0.34
PMS2-202ENST00000380416 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
PMS2-202ENST00000380416 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
PMS2-202ENST00000380416 SMARCA4P51532 1647 aa17■□□□□ 0.31
PMS2-202ENST00000380416 WDR62O43379 1518 aa17■□□□□ 0.31
PMS2-202ENST00000380416 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
PMS2-202ENST00000380416 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
PMS2-202ENST00000380416 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
PMS2-202ENST00000380416 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
PMS2-202ENST00000380416 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
PMS2-202ENST00000380416 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
PMS2-202ENST00000380416 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
PMS2-202ENST00000380416 ARHGEF11O15085 1522 aa16.83■□□□□ 0.28
PMS2-202ENST00000380416 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
PMS2-202ENST00000380416 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
PMS2-202ENST00000380416 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
PMS2-202ENST00000380416 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
PMS2-202ENST00000380416 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
PMS2-202ENST00000380416 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
PMS2-202ENST00000380416 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
PMS2-202ENST00000380416 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
PMS2-202ENST00000380416 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
PMS2-202ENST00000380416 CFTRP13569 1480 aa16.45■□□□□ 0.22
PMS2-202ENST00000380416 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
PMS2-202ENST00000380416 CHD1O14646 1710 aa16.43■□□□□ 0.22
PMS2-202ENST00000380416 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
PMS2-202ENST00000380416 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
PMS2-202ENST00000380416 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
PMS2-202ENST00000380416 WIZO95785 1651 aa16.33■□□□□ 0.2
PMS2-202ENST00000380416 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
PMS2-202ENST00000380416 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
PMS2-202ENST00000380416 TOPBP1Q92547 1522 aa16.21■□□□□ 0.19
PMS2-202ENST00000380416 TARBP1Q13395 1621 aaKnown RBP16.18■□□□□ 0.18
PMS2-202ENST00000380416 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.181e-7■■■■□ 21.1
PMS2-202ENST00000380416 KCNA4P22459 653 aa16.16■□□□□ 0.18
PMS2-202ENST00000380416 FBLN2P98095 1184 aa16.14■□□□□ 0.17
PMS2-202ENST00000380416 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
PMS2-202ENST00000380416 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
PMS2-202ENST00000380416 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
PMS2-202ENST00000380416 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
PMS2-202ENST00000380416 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
PMS2-202ENST00000380416 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
PMS2-202ENST00000380416 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
PMS2-202ENST00000380416 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
PMS2-202ENST00000380416 KIF13AQ9H1H9 1805 aa16.02■□□□□ 0.16
PMS2-202ENST00000380416 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
PMS2-202ENST00000380416 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
PMS2-202ENST00000380416 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
PMS2-202ENST00000380416 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
PMS2-202ENST00000380416 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
PMS2-202ENST00000380416 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
PMS2-202ENST00000380416 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
PMS2-202ENST00000380416 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
PMS2-202ENST00000380416 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
PMS2-202ENST00000380416 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
PMS2-202ENST00000380416 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
PMS2-202ENST00000380416 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
PMS2-202ENST00000380416 SOGA1O94964 1423 aa15.84■□□□□ 0.13
PMS2-202ENST00000380416 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
PMS2-202ENST00000380416 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms