RNA–Protein interactions for RNA: ENST00000380283.4

PXDC1-202, Transcript of PX domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXDC1, Length 2,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXDC1-202ENST00000380283 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.94■■■□□ 2.066e-9■■■■■ 134.6
PXDC1-202ENST00000380283 FKBP4Q02790 459 aaKnown RBP eCLIP30.28■■■□□ 2.445e-10■■■■■ 50.9
PXDC1-202ENST00000380283 EIF3HO15372 352 aaKnown RBP eCLIP29.25■■■□□ 2.273e-7■■■■■ 34.1
PXDC1-202ENST00000380283 PCBP2Q15366 365 aaKnown RBP eCLIP25.84■■□□□ 1.732e-7■■■■■ 32.4
PXDC1-202ENST00000380283 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.25■■□□□ 1.319e-7■■■■■ 30.9
PXDC1-202ENST00000380283 UPF1Q92900 1129 aaKnown RBP eCLIP29.88■■■□□ 2.379e-7■■■■■ 30.1
PXDC1-202ENST00000380283 AKAP1Q92667 903 aaKnown RBP eCLIP24.78■■□□□ 1.563e-8■■■■■ 27.4
PXDC1-202ENST00000380283 DDX3XO00571 662 aaKnown RBP eCLIP28.61■■■□□ 2.178e-8■■■■□ 26.1
PXDC1-202ENST00000380283 TIA1P31483 386 aaKnown RBP eCLIP25.17■■□□□ 1.628e-9■■■■□ 24.3
PXDC1-202ENST00000380283 AQRO60306 1485 aaKnown RBP eCLIP39.78■■■■□ 3.966e-8■■■■□ 22.5
PXDC1-202ENST00000380283 DDX6P26196 483 aaKnown RBP eCLIP25.39■■□□□ 1.662e-7■■■■□ 21.8
PXDC1-202ENST00000380283 FTOQ9C0B1 505 aaKnown RBP eCLIP30.75■■■□□ 2.518e-9■■■■□ 19.3
PXDC1-202ENST00000380283 SF3B4Q15427 424 aaKnown RBP eCLIP25.57■■□□□ 1.684e-6■■■□□ 19.1
PXDC1-202ENST00000380283 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.7■■□□□ 1.542e-7■■■□□ 18.6
PXDC1-202ENST00000380283 HNRNPMP52272 730 aaKnown RBP eCLIP36.89■■■■□ 3.52e-6■■■□□ 18.1
PXDC1-202ENST00000380283 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.95■□□□□ 0.786e-7■■■□□ 17
PXDC1-202ENST00000380283 PRPF4O43172 522 aaKnown RBP eCLIP27.95■■■□□ 2.062e-9■■■□□ 16.2
PXDC1-202ENST00000380283 NKRFO15226 690 aaKnown RBP eCLIP29.19■■■□□ 2.263e-7■■■□□ 15.7
PXDC1-202ENST00000380283 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.5■■■□□ 2.157e-7■■□□□ 13.8
PXDC1-202ENST00000380283 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.47■■■□□ 2.156e-7■■□□□ 13.5
PXDC1-202ENST00000380283 HNRNPKP61978 463 aaKnown RBP eCLIP23.88■■□□□ 1.411e-6■■□□□ 12.4
PXDC1-202ENST00000380283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.45■■■□□ 2.154e-8■■□□□ 11.9
PXDC1-202ENST00000380283 QKIQ96PU8 341 aaKnown RBP eCLIP27.03■■□□□ 1.922e-7■□□□□ 10.6
PXDC1-202ENST00000380283 EFTUD2Q15029 972 aaKnown RBP eCLIP27.62■■■□□ 2.016e-7■□□□□ 10.2
PXDC1-202ENST00000380283 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.77■■■□□ 2.27e-6■□□□□ 9.4
PXDC1-202ENST00000380283 LARP4Q71RC2 724 aaKnown RBP eCLIP26.45■■□□□ 1.823e-10■□□□□ 8.5
Retrieved 26 of 26 RNA–protein pairs in 6 ms