RNA–Protein interactions for RNA: ENST00000379697.7

SH3KBP1-201, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 5 BASIC

Gene SH3KBP1, Length 1,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-201ENST00000379697 NISCHQ9Y2I1 1504 aa34.02■■■■□ 3.04
SH3KBP1-201ENST00000379697 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
SH3KBP1-201ENST00000379697 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
SH3KBP1-201ENST00000379697 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
SH3KBP1-201ENST00000379697 ABCC9O60706 1549 aa28.12■■■□□ 2.09
SH3KBP1-201ENST00000379697 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
SH3KBP1-201ENST00000379697 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
SH3KBP1-201ENST00000379697 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
SH3KBP1-201ENST00000379697 NACADO15069 1562 aa27.66■■■□□ 2.02
SH3KBP1-201ENST00000379697 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
SH3KBP1-201ENST00000379697 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
SH3KBP1-201ENST00000379697 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
SH3KBP1-201ENST00000379697 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SH3KBP1-201ENST00000379697 BICRAQ9NZM4 1560 aa26.61■■□□□ 1.85
SH3KBP1-201ENST00000379697 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
SH3KBP1-201ENST00000379697 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
SH3KBP1-201ENST00000379697 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
SH3KBP1-201ENST00000379697 MROH2BQ7Z745 1585 aa26.28■■□□□ 1.8
SH3KBP1-201ENST00000379697 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
SH3KBP1-201ENST00000379697 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
SH3KBP1-201ENST00000379697 WIZO95785 1651 aa26.05■■□□□ 1.76
SH3KBP1-201ENST00000379697 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
SH3KBP1-201ENST00000379697 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
SH3KBP1-201ENST00000379697 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
SH3KBP1-201ENST00000379697 ATAD2BQ9ULI0 1458 aa25.75■■□□□ 1.71
SH3KBP1-201ENST00000379697 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
SH3KBP1-201ENST00000379697 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
SH3KBP1-201ENST00000379697 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
SH3KBP1-201ENST00000379697 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
SH3KBP1-201ENST00000379697 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
SH3KBP1-201ENST00000379697 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
SH3KBP1-201ENST00000379697 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
SH3KBP1-201ENST00000379697 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
SH3KBP1-201ENST00000379697 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
SH3KBP1-201ENST00000379697 CFTRP13569 1480 aa24.96■■□□□ 1.59
SH3KBP1-201ENST00000379697 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
SH3KBP1-201ENST00000379697 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
SH3KBP1-201ENST00000379697 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
SH3KBP1-201ENST00000379697 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
SH3KBP1-201ENST00000379697 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
SH3KBP1-201ENST00000379697 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
SH3KBP1-201ENST00000379697 NESP48681 1621 aa24.67■■□□□ 1.54
SH3KBP1-201ENST00000379697 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
SH3KBP1-201ENST00000379697 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
SH3KBP1-201ENST00000379697 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
SH3KBP1-201ENST00000379697 CUX1P39880 1505 aa24.58■■□□□ 1.53
SH3KBP1-201ENST00000379697 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
SH3KBP1-201ENST00000379697 SOGA1O94964 1423 aa24.5■■□□□ 1.51
SH3KBP1-201ENST00000379697 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
SH3KBP1-201ENST00000379697 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
SH3KBP1-201ENST00000379697 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
SH3KBP1-201ENST00000379697 EEA1Q15075 1411 aa24.44■■□□□ 1.5
SH3KBP1-201ENST00000379697 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.5
SH3KBP1-201ENST00000379697 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SH3KBP1-201ENST00000379697 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
SH3KBP1-201ENST00000379697 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
SH3KBP1-201ENST00000379697 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
SH3KBP1-201ENST00000379697 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
SH3KBP1-201ENST00000379697 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
SH3KBP1-201ENST00000379697 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
SH3KBP1-201ENST00000379697 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
SH3KBP1-201ENST00000379697 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
SH3KBP1-201ENST00000379697 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
SH3KBP1-201ENST00000379697 CUX2O14529 1486 aa24.16■■□□□ 1.46
SH3KBP1-201ENST00000379697 KIF21BO75037 1637 aa24.13■■□□□ 1.45
SH3KBP1-201ENST00000379697 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
SH3KBP1-201ENST00000379697 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
SH3KBP1-201ENST00000379697 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
SH3KBP1-201ENST00000379697 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
SH3KBP1-201ENST00000379697 WDR62O43379 1518 aa24.06■■□□□ 1.44
SH3KBP1-201ENST00000379697 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
SH3KBP1-201ENST00000379697 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
SH3KBP1-201ENST00000379697 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
SH3KBP1-201ENST00000379697 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
SH3KBP1-201ENST00000379697 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
SH3KBP1-201ENST00000379697 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
SH3KBP1-201ENST00000379697 IGF1RP08069 1367 aa23.98■■□□□ 1.43
SH3KBP1-201ENST00000379697 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
SH3KBP1-201ENST00000379697 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
SH3KBP1-201ENST00000379697 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
SH3KBP1-201ENST00000379697 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
SH3KBP1-201ENST00000379697 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
SH3KBP1-201ENST00000379697 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
SH3KBP1-201ENST00000379697 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
SH3KBP1-201ENST00000379697 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
SH3KBP1-201ENST00000379697 CUL7Q14999 1698 aa23.81■■□□□ 1.4
SH3KBP1-201ENST00000379697 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
SH3KBP1-201ENST00000379697 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
SH3KBP1-201ENST00000379697 CLIP1P30622 1438 aa23.72■■□□□ 1.39
SH3KBP1-201ENST00000379697 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
SH3KBP1-201ENST00000379697 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
SH3KBP1-201ENST00000379697 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
SH3KBP1-201ENST00000379697 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
SH3KBP1-201ENST00000379697 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
SH3KBP1-201ENST00000379697 RANGAP1P46060 587 aaPredicted RBP23.61■■□□□ 1.37
SH3KBP1-201ENST00000379697 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
SH3KBP1-201ENST00000379697 CTTNBP2Q8WZ74 1663 aa23.52■■□□□ 1.36
SH3KBP1-201ENST00000379697 VPS8Q8N3P4 1428 aa23.51■■□□□ 1.35
SH3KBP1-201ENST00000379697 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
SH3KBP1-201ENST00000379697 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms