RNA–Protein interactions for RNA: ENST00000379660.4

SLC35B3-201, Transcript of solute carrier family 35 member B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35B3, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35B3-201ENST00000379660 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
SLC35B3-201ENST00000379660 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
SLC35B3-201ENST00000379660 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
SLC35B3-201ENST00000379660 DCAF1Q9Y4B6 1507 aa25.05■■□□□ 1.6
SLC35B3-201ENST00000379660 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
SLC35B3-201ENST00000379660 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
SLC35B3-201ENST00000379660 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
SLC35B3-201ENST00000379660 ABCC9O60706 1549 aa24.59■■□□□ 1.53
SLC35B3-201ENST00000379660 NACADO15069 1562 aa24.36■■□□□ 1.49
SLC35B3-201ENST00000379660 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
SLC35B3-201ENST00000379660 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
SLC35B3-201ENST00000379660 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
SLC35B3-201ENST00000379660 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
SLC35B3-201ENST00000379660 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
SLC35B3-201ENST00000379660 CECR2Q9BXF3 1484 aa23.61■■□□□ 1.37
SLC35B3-201ENST00000379660 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
SLC35B3-201ENST00000379660 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
SLC35B3-201ENST00000379660 WIZO95785 1651 aa23.37■■□□□ 1.33
SLC35B3-201ENST00000379660 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
SLC35B3-201ENST00000379660 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
SLC35B3-201ENST00000379660 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
SLC35B3-201ENST00000379660 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
SLC35B3-201ENST00000379660 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
SLC35B3-201ENST00000379660 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
SLC35B3-201ENST00000379660 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
SLC35B3-201ENST00000379660 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
SLC35B3-201ENST00000379660 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.24
SLC35B3-201ENST00000379660 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
SLC35B3-201ENST00000379660 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.21
SLC35B3-201ENST00000379660 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
SLC35B3-201ENST00000379660 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
SLC35B3-201ENST00000379660 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
SLC35B3-201ENST00000379660 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
SLC35B3-201ENST00000379660 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
SLC35B3-201ENST00000379660 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
SLC35B3-201ENST00000379660 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
SLC35B3-201ENST00000379660 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
SLC35B3-201ENST00000379660 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
SLC35B3-201ENST00000379660 SOGA1O94964 1423 aa22.12■■□□□ 1.13
SLC35B3-201ENST00000379660 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
SLC35B3-201ENST00000379660 CFTRP13569 1480 aa22.1■■□□□ 1.13
SLC35B3-201ENST00000379660 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
SLC35B3-201ENST00000379660 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
SLC35B3-201ENST00000379660 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
SLC35B3-201ENST00000379660 EEA1Q15075 1411 aa22■■□□□ 1.11
SLC35B3-201ENST00000379660 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
SLC35B3-201ENST00000379660 CUX1P39880 1505 aa21.96■■□□□ 1.11
SLC35B3-201ENST00000379660 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
SLC35B3-201ENST00000379660 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
SLC35B3-201ENST00000379660 KIF21BO75037 1637 aa21.83■■□□□ 1.09
SLC35B3-201ENST00000379660 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
SLC35B3-201ENST00000379660 NESP48681 1621 aa21.75■■□□□ 1.07
SLC35B3-201ENST00000379660 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
SLC35B3-201ENST00000379660 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
SLC35B3-201ENST00000379660 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SLC35B3-201ENST00000379660 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
SLC35B3-201ENST00000379660 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
SLC35B3-201ENST00000379660 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
SLC35B3-201ENST00000379660 LAMC3Q9Y6N6 1575 aa21.69■■□□□ 1.06
SLC35B3-201ENST00000379660 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
SLC35B3-201ENST00000379660 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
SLC35B3-201ENST00000379660 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
SLC35B3-201ENST00000379660 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
SLC35B3-201ENST00000379660 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
SLC35B3-201ENST00000379660 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
SLC35B3-201ENST00000379660 UBTFP17480 764 aaKnown RBP21.57■■□□□ 1.04
SLC35B3-201ENST00000379660 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
SLC35B3-201ENST00000379660 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
SLC35B3-201ENST00000379660 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
SLC35B3-201ENST00000379660 CUX2O14529 1486 aa21.51■■□□□ 1.03
SLC35B3-201ENST00000379660 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SLC35B3-201ENST00000379660 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
SLC35B3-201ENST00000379660 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
SLC35B3-201ENST00000379660 CLIP1P30622 1438 aa21.44■■□□□ 1.02
SLC35B3-201ENST00000379660 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
SLC35B3-201ENST00000379660 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
SLC35B3-201ENST00000379660 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
SLC35B3-201ENST00000379660 IGF1RP08069 1367 aa21.4■■□□□ 1.02
SLC35B3-201ENST00000379660 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
SLC35B3-201ENST00000379660 HRCP23327 699 aa21.37■■□□□ 1.01
SLC35B3-201ENST00000379660 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
SLC35B3-201ENST00000379660 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
SLC35B3-201ENST00000379660 ARAP1Q96P48 1450 aa21.29■■□□□ 1
SLC35B3-201ENST00000379660 CARMIL1Q5VZK9 1371 aa21.26■□□□□ 0.99
SLC35B3-201ENST00000379660 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
SLC35B3-201ENST00000379660 CUL7Q14999 1698 aa21.25■□□□□ 0.99
SLC35B3-201ENST00000379660 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
SLC35B3-201ENST00000379660 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
SLC35B3-201ENST00000379660 ARHGAP35Q9NRY4 1499 aa21.2■□□□□ 0.98
SLC35B3-201ENST00000379660 WDR62O43379 1518 aa21.13■□□□□ 0.97
SLC35B3-201ENST00000379660 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
SLC35B3-201ENST00000379660 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
SLC35B3-201ENST00000379660 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
SLC35B3-201ENST00000379660 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
SLC35B3-201ENST00000379660 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
SLC35B3-201ENST00000379660 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
SLC35B3-201ENST00000379660 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
SLC35B3-201ENST00000379660 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
SLC35B3-201ENST00000379660 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.953e-6■■■■■ 31.4
SLC35B3-201ENST00000379660 EFCAB5A4FU69 1503 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms