RNA–Protein interactions for RNA: ENST00000378975.7

U2AF1L4-202, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 1 (best) BASIC

Gene U2AF1L4, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-202ENST00000378975 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
U2AF1L4-202ENST00000378975 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
U2AF1L4-202ENST00000378975 ABCC9O60706 1549 aa24.46■■□□□ 1.51
U2AF1L4-202ENST00000378975 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
U2AF1L4-202ENST00000378975 NACADO15069 1562 aa23.35■■□□□ 1.33
U2AF1L4-202ENST00000378975 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
U2AF1L4-202ENST00000378975 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
U2AF1L4-202ENST00000378975 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
U2AF1L4-202ENST00000378975 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
U2AF1L4-202ENST00000378975 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
U2AF1L4-202ENST00000378975 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
U2AF1L4-202ENST00000378975 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
U2AF1L4-202ENST00000378975 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
U2AF1L4-202ENST00000378975 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
U2AF1L4-202ENST00000378975 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
U2AF1L4-202ENST00000378975 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
U2AF1L4-202ENST00000378975 CC2D2AQ9P2K1 1620 aa22.19■■□□□ 1.14
U2AF1L4-202ENST00000378975 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
U2AF1L4-202ENST00000378975 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
U2AF1L4-202ENST00000378975 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
U2AF1L4-202ENST00000378975 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
U2AF1L4-202ENST00000378975 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
U2AF1L4-202ENST00000378975 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
U2AF1L4-202ENST00000378975 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
U2AF1L4-202ENST00000378975 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
U2AF1L4-202ENST00000378975 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
U2AF1L4-202ENST00000378975 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
U2AF1L4-202ENST00000378975 WIZO95785 1651 aa21.28■■□□□ 1
U2AF1L4-202ENST00000378975 NESP48681 1621 aa21.16■□□□□ 0.98
U2AF1L4-202ENST00000378975 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
U2AF1L4-202ENST00000378975 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
U2AF1L4-202ENST00000378975 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
U2AF1L4-202ENST00000378975 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
U2AF1L4-202ENST00000378975 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
U2AF1L4-202ENST00000378975 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
U2AF1L4-202ENST00000378975 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
U2AF1L4-202ENST00000378975 CUX2O14529 1486 aa20.91■□□□□ 0.94
U2AF1L4-202ENST00000378975 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
U2AF1L4-202ENST00000378975 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
U2AF1L4-202ENST00000378975 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
U2AF1L4-202ENST00000378975 CFTRP13569 1480 aa20.74■□□□□ 0.91
U2AF1L4-202ENST00000378975 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
U2AF1L4-202ENST00000378975 WDR62O43379 1518 aa20.68■□□□□ 0.9
U2AF1L4-202ENST00000378975 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
U2AF1L4-202ENST00000378975 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
U2AF1L4-202ENST00000378975 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
U2AF1L4-202ENST00000378975 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
U2AF1L4-202ENST00000378975 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
U2AF1L4-202ENST00000378975 DNMBPQ6XZF7 1577 aa20.32■□□□□ 0.84
U2AF1L4-202ENST00000378975 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
U2AF1L4-202ENST00000378975 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
U2AF1L4-202ENST00000378975 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
U2AF1L4-202ENST00000378975 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
U2AF1L4-202ENST00000378975 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
U2AF1L4-202ENST00000378975 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
U2AF1L4-202ENST00000378975 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
U2AF1L4-202ENST00000378975 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
U2AF1L4-202ENST00000378975 CUX1P39880 1505 aa20.16■□□□□ 0.82
U2AF1L4-202ENST00000378975 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
U2AF1L4-202ENST00000378975 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
U2AF1L4-202ENST00000378975 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
U2AF1L4-202ENST00000378975 CHD1O14646 1710 aa20.02■□□□□ 0.8
U2AF1L4-202ENST00000378975 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
U2AF1L4-202ENST00000378975 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
U2AF1L4-202ENST00000378975 SOGA1O94964 1423 aa19.97■□□□□ 0.79
U2AF1L4-202ENST00000378975 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
U2AF1L4-202ENST00000378975 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
U2AF1L4-202ENST00000378975 TOP2BQ02880 1626 aa19.93■□□□□ 0.78
U2AF1L4-202ENST00000378975 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
U2AF1L4-202ENST00000378975 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
U2AF1L4-202ENST00000378975 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
U2AF1L4-202ENST00000378975 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
U2AF1L4-202ENST00000378975 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
U2AF1L4-202ENST00000378975 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
U2AF1L4-202ENST00000378975 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
U2AF1L4-202ENST00000378975 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
U2AF1L4-202ENST00000378975 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
U2AF1L4-202ENST00000378975 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
U2AF1L4-202ENST00000378975 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
U2AF1L4-202ENST00000378975 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
U2AF1L4-202ENST00000378975 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
U2AF1L4-202ENST00000378975 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
U2AF1L4-202ENST00000378975 SYNJ2O15056 1496 aa19.72■□□□□ 0.75
U2AF1L4-202ENST00000378975 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
U2AF1L4-202ENST00000378975 FBLN2P98095 1184 aa19.68■□□□□ 0.74
U2AF1L4-202ENST00000378975 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
U2AF1L4-202ENST00000378975 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
U2AF1L4-202ENST00000378975 ARAP1Q96P48 1450 aa19.59■□□□□ 0.73
U2AF1L4-202ENST00000378975 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
U2AF1L4-202ENST00000378975 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
U2AF1L4-202ENST00000378975 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
U2AF1L4-202ENST00000378975 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
U2AF1L4-202ENST00000378975 NUP160Q12769 1436 aa19.51■□□□□ 0.71
U2AF1L4-202ENST00000378975 SHROOM2Q13796 1616 aa19.49■□□□□ 0.71
U2AF1L4-202ENST00000378975 ERCC6L2Q5T890 1561 aa19.48■□□□□ 0.71
U2AF1L4-202ENST00000378975 CUL7Q14999 1698 aa19.45■□□□□ 0.7
U2AF1L4-202ENST00000378975 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
U2AF1L4-202ENST00000378975 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
U2AF1L4-202ENST00000378975 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
U2AF1L4-202ENST00000378975 IGF1RP08069 1367 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms