RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
UBD-203ENST00000377050 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.57
UBD-203ENST00000377050 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
UBD-203ENST00000377050 ABCC9O60706 1549 aa23.36■■□□□ 1.33
UBD-203ENST00000377050 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
UBD-203ENST00000377050 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
UBD-203ENST00000377050 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
UBD-203ENST00000377050 NACADO15069 1562 aa21.64■■□□□ 1.05
UBD-203ENST00000377050 PABPN1Q86U42 306 aaKnown RBP eCLIP21.59■■□□□ 1.05
UBD-203ENST00000377050 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
UBD-203ENST00000377050 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
UBD-203ENST00000377050 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
UBD-203ENST00000377050 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
UBD-203ENST00000377050 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
UBD-203ENST00000377050 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
UBD-203ENST00000377050 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
UBD-203ENST00000377050 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
UBD-203ENST00000377050 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.97
UBD-203ENST00000377050 SHROOM4Q9ULL8 1493 aa21.03■□□□□ 0.96
UBD-203ENST00000377050 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
UBD-203ENST00000377050 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
UBD-203ENST00000377050 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
UBD-203ENST00000377050 CUX2O14529 1486 aa20.5■□□□□ 0.87
UBD-203ENST00000377050 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
UBD-203ENST00000377050 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
UBD-203ENST00000377050 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
UBD-203ENST00000377050 FOXD1Q16676 465 aa20■□□□□ 0.79
UBD-203ENST00000377050 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
UBD-203ENST00000377050 NESP48681 1621 aa19.82■□□□□ 0.76
UBD-203ENST00000377050 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
UBD-203ENST00000377050 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
UBD-203ENST00000377050 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
UBD-203ENST00000377050 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
UBD-203ENST00000377050 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
UBD-203ENST00000377050 KIF21AQ7Z4S6 1674 aa19.61■□□□□ 0.73
UBD-203ENST00000377050 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
UBD-203ENST00000377050 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
UBD-203ENST00000377050 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
UBD-203ENST00000377050 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
UBD-203ENST00000377050 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
UBD-203ENST00000377050 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
UBD-203ENST00000377050 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
UBD-203ENST00000377050 WDR62O43379 1518 aa19.4■□□□□ 0.7
UBD-203ENST00000377050 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
UBD-203ENST00000377050 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
UBD-203ENST00000377050 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
UBD-203ENST00000377050 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
UBD-203ENST00000377050 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
UBD-203ENST00000377050 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
UBD-203ENST00000377050 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
UBD-203ENST00000377050 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
UBD-203ENST00000377050 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
UBD-203ENST00000377050 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
UBD-203ENST00000377050 POTEDQ86YR6 584 aa18.99■□□□□ 0.63
UBD-203ENST00000377050 MSH5O43196 834 aa18.98■□□□□ 0.63
UBD-203ENST00000377050 URB2Q14146 1524 aaKnown RBP18.95■□□□□ 0.62
UBD-203ENST00000377050 CFTRP13569 1480 aa18.92■□□□□ 0.62
UBD-203ENST00000377050 WIZO95785 1651 aa18.89■□□□□ 0.61
UBD-203ENST00000377050 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
UBD-203ENST00000377050 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
UBD-203ENST00000377050 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
UBD-203ENST00000377050 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
UBD-203ENST00000377050 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
UBD-203ENST00000377050 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
UBD-203ENST00000377050 CHD1O14646 1710 aa18.76■□□□□ 0.59
UBD-203ENST00000377050 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
UBD-203ENST00000377050 PIAS4Q8N2W9 510 aaPredicted RBP18.68■□□□□ 0.58
UBD-203ENST00000377050 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
UBD-203ENST00000377050 FBLN2P98095 1184 aa18.66■□□□□ 0.58
UBD-203ENST00000377050 TOPBP1Q92547 1522 aa18.64■□□□□ 0.58
UBD-203ENST00000377050 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
UBD-203ENST00000377050 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
UBD-203ENST00000377050 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
UBD-203ENST00000377050 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
UBD-203ENST00000377050 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.56
UBD-203ENST00000377050 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
UBD-203ENST00000377050 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
UBD-203ENST00000377050 CHMP7Q8WUX9 453 aaPredicted RBP18.41■□□□□ 0.54
UBD-203ENST00000377050 POLA1P09884 1462 aaPredicted RBP18.4■□□□□ 0.54
UBD-203ENST00000377050 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
UBD-203ENST00000377050 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
UBD-203ENST00000377050 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
UBD-203ENST00000377050 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
UBD-203ENST00000377050 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
UBD-203ENST00000377050 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
UBD-203ENST00000377050 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
UBD-203ENST00000377050 ADRA2BP18089 450 aa18.34■□□□□ 0.53
UBD-203ENST00000377050 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
UBD-203ENST00000377050 SOGA1O94964 1423 aa18.32■□□□□ 0.52
UBD-203ENST00000377050 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
UBD-203ENST00000377050 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
UBD-203ENST00000377050 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
UBD-203ENST00000377050 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
UBD-203ENST00000377050 KIF13AQ9H1H9 1805 aa18.17■□□□□ 0.5
UBD-203ENST00000377050 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
UBD-203ENST00000377050 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
UBD-203ENST00000377050 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
UBD-203ENST00000377050 KDM4FA0A1W2PPD8 638 aa18.03■□□□□ 0.48
UBD-203ENST00000377050 CUX1P39880 1505 aa18.03■□□□□ 0.48
UBD-203ENST00000377050 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms